Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
BRF1Q92994 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF1Q92994 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 AC107890.1-201ENST00000422478 521 ntBASIC18.57■□□□□ 0.56
BRF1Q92994 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF1Q92994 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF1Q92994 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.57■□□□□ 0.56
BRF1Q92994 AC069120.2-201ENST00000524091 540 ntBASIC18.57■□□□□ 0.56
BRF1Q92994 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.57■□□□□ 0.56
BRF1Q92994 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.57■□□□□ 0.56
BRF1Q92994 AL512361.1-201ENST00000554200 418 ntBASIC18.57■□□□□ 0.56
BRF1Q92994 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
BRF1Q92994 AC140878.1-201ENST00000565277 250 ntBASIC18.57■□□□□ 0.56
BRF1Q92994 MIR6069-201ENST00000620069 79 ntBASIC18.57■□□□□ 0.56
BRF1Q92994 AC073592.8-201ENST00000624126 511 ntBASIC18.57■□□□□ 0.56
BRF1Q92994 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
BRF1Q92994 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF1Q92994 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF1Q92994 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.57■□□□□ 0.56
BRF1Q92994 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.57■□□□□ 0.56
BRF1Q92994 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF1Q92994 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.57■□□□□ 0.56
BRF1Q92994 C18orf15-201ENST00000623680 2534 ntBASIC18.57■□□□□ 0.56
BRF1Q92994 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF1Q92994 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
BRF1Q92994 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRF1Q92994 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.56■□□□□ 0.56
BRF1Q92994 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.56■□□□□ 0.56
BRF1Q92994 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.56■□□□□ 0.56
BRF1Q92994 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.56■□□□□ 0.56
BRF1Q92994 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.56■□□□□ 0.56
BRF1Q92994 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
BRF1Q92994 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF1Q92994 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.56■□□□□ 0.56
BRF1Q92994 AC092580.3-201ENST00000430932 139 ntBASIC18.56■□□□□ 0.56
BRF1Q92994 SERBP1P3-201ENST00000459980 809 ntBASIC18.56■□□□□ 0.56
BRF1Q92994 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.56■□□□□ 0.56
BRF1Q92994 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.56■□□□□ 0.56
BRF1Q92994 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.56■□□□□ 0.56
BRF1Q92994 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.56■□□□□ 0.56
BRF1Q92994 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.56■□□□□ 0.56
BRF1Q92994 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 AC025048.3-201ENST00000590609 569 ntBASIC18.56■□□□□ 0.56
BRF1Q92994 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF1Q92994 AC005702.4-201ENST00000618393 416 ntBASIC18.56■□□□□ 0.56
BRF1Q92994 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
BRF1Q92994 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.56■□□□□ 0.56
BRF1Q92994 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
BRF1Q92994 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.56■□□□□ 0.56
BRF1Q92994 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
BRF1Q92994 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF1Q92994 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
BRF1Q92994 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF1Q92994 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRF1Q92994 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF1Q92994 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF1Q92994 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF1Q92994 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF1Q92994 AL109954.1-202ENST00000564051 2148 ntBASIC18.55■□□□□ 0.56
BRF1Q92994 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF1Q92994 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF1Q92994 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF1Q92994 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF1Q92994 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF1Q92994 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.55■□□□□ 0.56
BRF1Q92994 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF1Q92994 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF1Q92994 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF1Q92994 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF1Q92994 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF1Q92994 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF1Q92994 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF1Q92994 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF1Q92994 TREML5P-201ENST00000421694 576 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms