Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.78■□□□□ 0.28
DDX1Q92499 AC025048.3-201ENST00000590609 569 ntBASIC16.78■□□□□ 0.28
DDX1Q92499 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DDX1Q92499 AC004233.3-201ENST00000607794 1269 ntBASIC16.78■□□□□ 0.28
DDX1Q92499 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DDX1Q92499 AC005702.4-201ENST00000618393 416 ntBASIC16.78■□□□□ 0.28
DDX1Q92499 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.78■□□□□ 0.28
DDX1Q92499 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DDX1Q92499 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.78■□□□□ 0.28
DDX1Q92499 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
DDX1Q92499 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
DDX1Q92499 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DDX1Q92499 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DDX1Q92499 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DDX1Q92499 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DDX1Q92499 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.78■□□□□ 0.28
DDX1Q92499 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.78■□□□□ 0.28
DDX1Q92499 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
DDX1Q92499 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DDX1Q92499 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DDX1Q92499 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.77■□□□□ 0.28
DDX1Q92499 KRT8P44-201ENST00000441609 1350 ntBASIC16.77■□□□□ 0.28
DDX1Q92499 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.77■□□□□ 0.28
DDX1Q92499 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
DDX1Q92499 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.77■□□□□ 0.28
DDX1Q92499 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.77■□□□□ 0.28
DDX1Q92499 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.77■□□□□ 0.28
DDX1Q92499 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
DDX1Q92499 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
DDX1Q92499 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.77■□□□□ 0.28
DDX1Q92499 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.77■□□□□ 0.28
DDX1Q92499 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
DDX1Q92499 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
DDX1Q92499 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DDX1Q92499 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DDX1Q92499 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DDX1Q92499 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.77■□□□□ 0.27
DDX1Q92499 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.77■□□□□ 0.27
DDX1Q92499 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
DDX1Q92499 AC103702.1-201ENST00000548801 2630 ntBASIC16.77■□□□□ 0.27
DDX1Q92499 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.77■□□□□ 0.27
DDX1Q92499 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
DDX1Q92499 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
DDX1Q92499 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.77■□□□□ 0.27
DDX1Q92499 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DDX1Q92499 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.77■□□□□ 0.27
DDX1Q92499 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
DDX1Q92499 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.77■□□□□ 0.27
DDX1Q92499 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
DDX1Q92499 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.76■□□□□ 0.27
DDX1Q92499 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.76■□□□□ 0.27
DDX1Q92499 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.76■□□□□ 0.27
DDX1Q92499 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
DDX1Q92499 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.76■□□□□ 0.27
DDX1Q92499 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.76■□□□□ 0.27
DDX1Q92499 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.76■□□□□ 0.27
DDX1Q92499 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.76■□□□□ 0.27
DDX1Q92499 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
DDX1Q92499 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.76■□□□□ 0.27
DDX1Q92499 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.76■□□□□ 0.27
DDX1Q92499 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.76■□□□□ 0.27
DDX1Q92499 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.76■□□□□ 0.27
DDX1Q92499 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.76■□□□□ 0.27
DDX1Q92499 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.76■□□□□ 0.27
DDX1Q92499 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
DDX1Q92499 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 MIR6069-201ENST00000620069 79 ntBASIC16.76■□□□□ 0.27
DDX1Q92499 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.76■□□□□ 0.27
DDX1Q92499 DBET-201ENST00000630918 3363 ntBASIC16.76■□□□□ 0.27
DDX1Q92499 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.76■□□□□ 0.27
DDX1Q92499 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.76■□□□□ 0.27
DDX1Q92499 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DDX1Q92499 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.76■□□□□ 0.27
DDX1Q92499 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms