Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 AL132994.2-201ENST00000603120 687 ntBASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 AC004686.1-201ENST00000605113 538 ntBASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 AL162426.1-201ENST00000624141 743 ntBASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 IL9RP3-201ENST00000442856 1674 ntBASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 NAP1L6-202ENST00000641404 1222 ntBASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 MRPL37P1-201ENST00000592451 1337 ntBASIC16.08■□□□□ 0.16
PRUNE2Q8WUY3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 AL136309.1-201ENST00000403917 691 ntBASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 AC018463.1-201ENST00000456674 917 ntBASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 COX20P1-201ENST00000366529 357 ntBASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 CHMP1AP1-201ENST00000445563 662 ntBASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 AC005632.3-201ENST00000605544 308 ntBASIC16.07■□□□□ 0.16
PRUNE2Q8WUY3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 RCC2P8-201ENST00000502779 1035 ntBASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 AC002472.4-201ENST00000641915 272 ntBASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 GGT3P-204ENST00000453783 1664 ntBASIC16.06■□□□□ 0.16
PRUNE2Q8WUY3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 AC024293.1-201ENST00000467930 498 ntBASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 AC011247.3-201ENST00000603297 438 ntBASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PRUNE2Q8WUY3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms