Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 HIST3H2BA-201ENST00000436555 524 ntBASIC17.17■□□□□ 0.34
VPS52Q8N1B4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 RRP7BP-205ENST00000566851 833 ntBASIC17.17■□□□□ 0.34
VPS52Q8N1B4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 WFDC1-204ENST00000613603 549 ntBASIC17.17■□□□□ 0.34
VPS52Q8N1B4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 AC132872.4-202ENST00000622924 2756 ntBASIC17.17■□□□□ 0.34
VPS52Q8N1B4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VPS52Q8N1B4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VPS52Q8N1B4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 MST1L-201ENST00000442552 2185 ntBASIC17.15■□□□□ 0.34
VPS52Q8N1B4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 TMEM14DP-201ENST00000422205 345 ntBASIC17.15■□□□□ 0.34
VPS52Q8N1B4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 AC022210.1-201ENST00000449856 793 ntBASIC17.15■□□□□ 0.34
VPS52Q8N1B4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.15■□□□□ 0.34
VPS52Q8N1B4 TMEM261P1-201ENST00000604899 340 ntBASIC17.15■□□□□ 0.34
VPS52Q8N1B4 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.15■□□□□ 0.34
VPS52Q8N1B4 MIR6799-201ENST00000620297 69 ntBASIC17.15■□□□□ 0.34
VPS52Q8N1B4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms