Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA4P78363 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ABCA4P78363 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCA4P78363 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA4P78363 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.56□□□□□ -0.24
ABCA4P78363 SLED1-202ENST00000512051 380 ntBASIC13.56□□□□□ -0.24
ABCA4P78363 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 DUX4L45-201ENST00000566406 1057 ntBASIC13.56□□□□□ -0.24
ABCA4P78363 AL022328.3-201ENST00000607943 679 ntBASIC13.56□□□□□ -0.24
ABCA4P78363 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 MSTO2P-201ENST00000314835 1709 ntBASIC13.56□□□□□ -0.24
ABCA4P78363 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 ALOX12P2-203ENST00000570921 1945 ntBASIC13.56□□□□□ -0.24
ABCA4P78363 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA4P78363 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 AC134312.5-201ENST00000568031 1313 ntBASIC13.56□□□□□ -0.24
ABCA4P78363 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
ABCA4P78363 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCA4P78363 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA4P78363 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCA4P78363 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 RPL13AP20-201ENST00000459725 609 ntBASIC13.56□□□□□ -0.24
ABCA4P78363 POU5F1P6-201ENST00000466990 990 ntBASIC13.56□□□□□ -0.24
ABCA4P78363 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA4P78363 AP001063.1-201ENST00000568332 529 ntBASIC13.56□□□□□ -0.24
ABCA4P78363 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.56□□□□□ -0.24
ABCA4P78363 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ABCA4P78363 RHOXF1P1-202ENST00000635473 501 ntBASIC13.56□□□□□ -0.24
ABCA4P78363 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA4P78363 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ABCA4P78363 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCA4P78363 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA4P78363 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA4P78363 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCA4P78363 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA4P78363 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA4P78363 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCA4P78363 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
ABCA4P78363 BAATP1-201ENST00000412284 1225 ntBASIC13.55□□□□□ -0.24
ABCA4P78363 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA4P78363 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.55□□□□□ -0.24
ABCA4P78363 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA4P78363 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.55□□□□□ -0.24
ABCA4P78363 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCA4P78363 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.55□□□□□ -0.24
ABCA4P78363 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ABCA4P78363 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 PCDHA12-202ENST00000613593 2588 ntBASIC13.55□□□□□ -0.24
ABCA4P78363 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ABCA4P78363 AP001282.1-201ENST00000531301 1499 ntBASIC13.55□□□□□ -0.24
ABCA4P78363 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA4P78363 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
ABCA4P78363 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA4P78363 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms