Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.4■□□□□ 0.06
YBX1P67809 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.4■□□□□ 0.06
YBX1P67809 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
YBX1P67809 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 AC023908.3-201ENST00000564211 3047 ntBASIC15.4■□□□□ 0.06
YBX1P67809 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.4■□□□□ 0.06
YBX1P67809 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.4■□□□□ 0.06
YBX1P67809 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
YBX1P67809 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.39■□□□□ 0.05
YBX1P67809 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.39■□□□□ 0.05
YBX1P67809 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
YBX1P67809 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
YBX1P67809 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
YBX1P67809 AC105250.1-201ENST00000509378 2057 ntBASIC15.39■□□□□ 0.05
YBX1P67809 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.39■□□□□ 0.05
YBX1P67809 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.39■□□□□ 0.05
YBX1P67809 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
YBX1P67809 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.39■□□□□ 0.05
YBX1P67809 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.39■□□□□ 0.05
YBX1P67809 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
YBX1P67809 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.39■□□□□ 0.05
YBX1P67809 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.39■□□□□ 0.05
YBX1P67809 UGT1A2P-201ENST00000454886 866 ntBASIC15.39■□□□□ 0.05
YBX1P67809 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.39■□□□□ 0.05
YBX1P67809 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.39■□□□□ 0.05
YBX1P67809 AL844908.2-201ENST00000609461 460 ntBASIC15.39■□□□□ 0.05
YBX1P67809 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
YBX1P67809 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
YBX1P67809 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.39■□□□□ 0.05
YBX1P67809 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
YBX1P67809 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
YBX1P67809 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.39■□□□□ 0.05
YBX1P67809 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 AC011477.6-201ENST00000604980 1927 ntBASIC15.39■□□□□ 0.05
YBX1P67809 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBX1P67809 CROCCP1-201ENST00000426910 5675 ntBASIC15.39■□□□□ 0.05
YBX1P67809 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
YBX1P67809 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.38■□□□□ 0.05
YBX1P67809 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
YBX1P67809 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
YBX1P67809 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.38■□□□□ 0.05
YBX1P67809 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 TMBIM7P-203ENST00000641617 1718 ntBASIC15.38■□□□□ 0.05
YBX1P67809 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.38■□□□□ 0.05
YBX1P67809 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
YBX1P67809 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
YBX1P67809 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.38■□□□□ 0.05
YBX1P67809 MIR770-201ENST00000390219 98 ntBASIC15.38■□□□□ 0.05
YBX1P67809 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.38■□□□□ 0.05
YBX1P67809 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.38■□□□□ 0.05
YBX1P67809 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.38■□□□□ 0.05
YBX1P67809 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.38■□□□□ 0.05
YBX1P67809 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.38■□□□□ 0.05
YBX1P67809 EEF1DP4-201ENST00000446006 880 ntBASIC15.38■□□□□ 0.05
YBX1P67809 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.38■□□□□ 0.05
YBX1P67809 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.38■□□□□ 0.05
YBX1P67809 AC004890.2-204ENST00000481968 304 ntBASIC15.38■□□□□ 0.05
YBX1P67809 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.38■□□□□ 0.05
YBX1P67809 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.38■□□□□ 0.05
YBX1P67809 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.38■□□□□ 0.05
YBX1P67809 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 AC010336.2-201ENST00000564226 506 ntBASIC15.38■□□□□ 0.05
YBX1P67809 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.38■□□□□ 0.05
YBX1P67809 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
YBX1P67809 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
YBX1P67809 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms