Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
CPT1AP50416 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPT1AP50416 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.33■□□□□ 0.37
CPT1AP50416 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPT1AP50416 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.33■□□□□ 0.37
CPT1AP50416 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.33■□□□□ 0.37
CPT1AP50416 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
CPT1AP50416 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPT1AP50416 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.33■□□□□ 0.37
CPT1AP50416 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.33■□□□□ 0.36
CPT1AP50416 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.33■□□□□ 0.36
CPT1AP50416 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CPT1AP50416 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CPT1AP50416 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPT1AP50416 MIR326-201ENST00000362220 95 ntBASIC17.33■□□□□ 0.36
CPT1AP50416 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPT1AP50416 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CPT1AP50416 AC006033.1-201ENST00000440505 426 ntBASIC17.33■□□□□ 0.36
CPT1AP50416 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.33■□□□□ 0.36
CPT1AP50416 KRT8P13-201ENST00000463294 1010 ntBASIC17.33■□□□□ 0.36
CPT1AP50416 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.33■□□□□ 0.36
CPT1AP50416 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.33■□□□□ 0.36
CPT1AP50416 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPT1AP50416 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CPT1AP50416 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.33■□□□□ 0.36
CPT1AP50416 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPT1AP50416 AC084346.2-201ENST00000607097 949 ntBASIC17.33■□□□□ 0.36
CPT1AP50416 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.33■□□□□ 0.36
CPT1AP50416 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPT1AP50416 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPT1AP50416 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPT1AP50416 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CPT1AP50416 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPT1AP50416 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPT1AP50416 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPT1AP50416 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPT1AP50416 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPT1AP50416 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.33■□□□□ 0.36
CPT1AP50416 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CPT1AP50416 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CPT1AP50416 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CPT1AP50416 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 AD000864.1-201ENST00000624076 2295 ntBASIC17.32■□□□□ 0.36
CPT1AP50416 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.32■□□□□ 0.36
CPT1AP50416 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CPT1AP50416 AL596087.1-201ENST00000400979 1969 ntBASIC17.32■□□□□ 0.36
CPT1AP50416 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.32■□□□□ 0.36
CPT1AP50416 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 ACTBP8-201ENST00000403258 1108 ntBASIC17.32■□□□□ 0.36
CPT1AP50416 CD8B2-202ENST00000417670 633 ntBASIC17.32■□□□□ 0.36
CPT1AP50416 NUS1P3-201ENST00000423502 862 ntBASIC17.32■□□□□ 0.36
CPT1AP50416 AC114812.1-204ENST00000449669 728 ntBASIC17.32■□□□□ 0.36
CPT1AP50416 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CPT1AP50416 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.32■□□□□ 0.36
CPT1AP50416 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.32■□□□□ 0.36
CPT1AP50416 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.32■□□□□ 0.36
CPT1AP50416 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.32■□□□□ 0.36
CPT1AP50416 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.32■□□□□ 0.36
CPT1AP50416 AL118558.3-201ENST00000607414 1079 ntBASIC17.32■□□□□ 0.36
CPT1AP50416 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.32■□□□□ 0.36
CPT1AP50416 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
CPT1AP50416 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CPT1AP50416 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.32■□□□□ 0.36
CPT1AP50416 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CPT1AP50416 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CPT1AP50416 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPT1AP50416 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPT1AP50416 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPT1AP50416 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CPT1AP50416 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPT1AP50416 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPT1AP50416 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.31■□□□□ 0.36
CPT1AP50416 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CPT1AP50416 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPT1AP50416 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPT1AP50416 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.31■□□□□ 0.36
CPT1AP50416 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPT1AP50416 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CPT1AP50416 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CPT1AP50416 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.31■□□□□ 0.36
CPT1AP50416 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPT1AP50416 GOLGA2P4-201ENST00000441462 777 ntBASIC17.31■□□□□ 0.36
CPT1AP50416 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.31■□□□□ 0.36
CPT1AP50416 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CPT1AP50416 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPT1AP50416 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms