Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.66□□□□□ -0.06
HTR3AP46098 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR3AP46098 AC079781.4-201ENST00000641908 219 ntBASIC14.66□□□□□ -0.06
HTR3AP46098 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HTR3AP46098 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR3AP46098 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR3AP46098 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.66□□□□□ -0.06
HTR3AP46098 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR3AP46098 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
HTR3AP46098 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR3AP46098 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR3AP46098 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR3AP46098 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
HTR3AP46098 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HTR3AP46098 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR3AP46098 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HTR3AP46098 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
HTR3AP46098 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR3AP46098 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.66□□□□□ -0.06
HTR3AP46098 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR3AP46098 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HTR3AP46098 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HTR3AP46098 AL137784.3-201ENST00000623858 2288 ntBASIC14.66□□□□□ -0.06
HTR3AP46098 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HTR3AP46098 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.65□□□□□ -0.06
HTR3AP46098 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HTR3AP46098 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.65□□□□□ -0.06
HTR3AP46098 AP3S2-216ENST00000617003 1561 ntBASIC14.65□□□□□ -0.06
HTR3AP46098 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.65□□□□□ -0.06
HTR3AP46098 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.65□□□□□ -0.06
HTR3AP46098 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.65□□□□□ -0.06
HTR3AP46098 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
HTR3AP46098 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.65□□□□□ -0.06
HTR3AP46098 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 AC112504.1-201ENST00000623415 1841 ntBASIC14.65□□□□□ -0.06
HTR3AP46098 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HTR3AP46098 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HTR3AP46098 AP006288.1-201ENST00000446065 395 ntBASIC14.65□□□□□ -0.06
HTR3AP46098 AL139010.1-201ENST00000454878 894 ntBASIC14.65□□□□□ -0.06
HTR3AP46098 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.65□□□□□ -0.06
HTR3AP46098 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.65□□□□□ -0.06
HTR3AP46098 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.65□□□□□ -0.06
HTR3AP46098 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.65□□□□□ -0.06
HTR3AP46098 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.65□□□□□ -0.06
HTR3AP46098 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.65□□□□□ -0.06
HTR3AP46098 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.65□□□□□ -0.06
HTR3AP46098 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
HTR3AP46098 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
HTR3AP46098 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HTR3AP46098 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.65□□□□□ -0.06
HTR3AP46098 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HTR3AP46098 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HTR3AP46098 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HTR3AP46098 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HTR3AP46098 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HTR3AP46098 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HTR3AP46098 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HTR3AP46098 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HTR3AP46098 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HTR3AP46098 AC006486.2-201ENST00000624246 2199 ntBASIC14.64□□□□□ -0.07
HTR3AP46098 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HTR3AP46098 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.64□□□□□ -0.07
HTR3AP46098 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HTR3AP46098 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.64□□□□□ -0.07
HTR3AP46098 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HTR3AP46098 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.64□□□□□ -0.07
HTR3AP46098 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.64□□□□□ -0.07
HTR3AP46098 AL353705.2-201ENST00000428243 662 ntBASIC14.64□□□□□ -0.07
HTR3AP46098 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.64□□□□□ -0.07
HTR3AP46098 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.64□□□□□ -0.07
HTR3AP46098 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.64□□□□□ -0.07
HTR3AP46098 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.64□□□□□ -0.07
HTR3AP46098 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.64□□□□□ -0.07
HTR3AP46098 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.64□□□□□ -0.07
HTR3AP46098 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.64□□□□□ -0.07
HTR3AP46098 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.64□□□□□ -0.07
HTR3AP46098 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.64□□□□□ -0.07
HTR3AP46098 ALG1L8P-201ENST00000533887 760 ntBASIC14.64□□□□□ -0.07
HTR3AP46098 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HTR3AP46098 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.64□□□□□ -0.07
HTR3AP46098 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
HTR3AP46098 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.64□□□□□ -0.07
HTR3AP46098 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.64□□□□□ -0.07
HTR3AP46098 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HTR3AP46098 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms