Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCK1P35558 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCK1P35558 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCK1P35558 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.69■□□□□ 0.26
PCK1P35558 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.69■□□□□ 0.26
PCK1P35558 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.69■□□□□ 0.26
PCK1P35558 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.69■□□□□ 0.26
PCK1P35558 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.69■□□□□ 0.26
PCK1P35558 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.69■□□□□ 0.26
PCK1P35558 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.69■□□□□ 0.26
PCK1P35558 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCK1P35558 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.69■□□□□ 0.26
PCK1P35558 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.69■□□□□ 0.26
PCK1P35558 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PCK1P35558 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.69■□□□□ 0.26
PCK1P35558 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.69■□□□□ 0.26
PCK1P35558 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCK1P35558 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCK1P35558 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.69■□□□□ 0.26
PCK1P35558 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.69■□□□□ 0.26
PCK1P35558 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.68■□□□□ 0.26
PCK1P35558 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PCK1P35558 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCK1P35558 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCK1P35558 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 AC254562.1-201ENST00000417586 456 ntBASIC16.68■□□□□ 0.26
PCK1P35558 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.68■□□□□ 0.26
PCK1P35558 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 RBPMS2P1-201ENST00000437762 623 ntBASIC16.68■□□□□ 0.26
PCK1P35558 SPDYE14P-201ENST00000442619 822 ntBASIC16.68■□□□□ 0.26
PCK1P35558 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.68■□□□□ 0.26
PCK1P35558 AP006288.1-201ENST00000446065 395 ntBASIC16.68■□□□□ 0.26
PCK1P35558 AC023141.5-201ENST00000458585 616 ntBASIC16.68■□□□□ 0.26
PCK1P35558 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.68■□□□□ 0.26
PCK1P35558 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCK1P35558 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.68■□□□□ 0.26
PCK1P35558 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.68■□□□□ 0.26
PCK1P35558 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.68■□□□□ 0.26
PCK1P35558 AC092865.5-201ENST00000545435 363 ntBASIC16.68■□□□□ 0.26
PCK1P35558 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.68■□□□□ 0.26
PCK1P35558 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCK1P35558 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.68■□□□□ 0.26
PCK1P35558 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.68■□□□□ 0.26
PCK1P35558 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.68■□□□□ 0.26
PCK1P35558 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.68■□□□□ 0.26
PCK1P35558 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.68■□□□□ 0.26
PCK1P35558 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.68■□□□□ 0.26
PCK1P35558 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PCK1P35558 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.68■□□□□ 0.26
PCK1P35558 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCK1P35558 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 TCAF2P1-201ENST00000291129 2421 ntBASIC16.68■□□□□ 0.26
PCK1P35558 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCK1P35558 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.68■□□□□ 0.26
PCK1P35558 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCK1P35558 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.68■□□□□ 0.26
PCK1P35558 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.68■□□□□ 0.26
PCK1P35558 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.68■□□□□ 0.26
PCK1P35558 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCK1P35558 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCK1P35558 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.67■□□□□ 0.26
PCK1P35558 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms