Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.06□□□□□ -0.16
HOXC12P31275 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.06□□□□□ -0.16
HOXC12P31275 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.06□□□□□ -0.16
HOXC12P31275 BANF1P1-201ENST00000553684 263 ntBASIC14.06□□□□□ -0.16
HOXC12P31275 AC010336.2-201ENST00000564226 506 ntBASIC14.06□□□□□ -0.16
HOXC12P31275 AC009407.1-201ENST00000568958 598 ntBASIC14.06□□□□□ -0.16
HOXC12P31275 AC140912.1-201ENST00000577171 1054 ntBASIC14.06□□□□□ -0.16
HOXC12P31275 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.06□□□□□ -0.16
HOXC12P31275 AL132655.2-201ENST00000596276 594 ntBASIC14.06□□□□□ -0.16
HOXC12P31275 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.06□□□□□ -0.16
HOXC12P31275 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 AL162274.1-201ENST00000617191 1098 ntBASIC14.06□□□□□ -0.16
HOXC12P31275 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HOXC12P31275 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HOXC12P31275 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HOXC12P31275 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HOXC12P31275 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.05□□□□□ -0.16
HOXC12P31275 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.05□□□□□ -0.16
HOXC12P31275 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.05□□□□□ -0.16
HOXC12P31275 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.05□□□□□ -0.16
HOXC12P31275 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
HOXC12P31275 MTHFR-217ENST00000641820 1569 ntBASIC14.05□□□□□ -0.16
HOXC12P31275 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HOXC12P31275 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HOXC12P31275 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.05□□□□□ -0.16
HOXC12P31275 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 AL080243.2-201ENST00000418783 582 ntBASIC14.05□□□□□ -0.16
HOXC12P31275 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.05□□□□□ -0.16
HOXC12P31275 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.05□□□□□ -0.16
HOXC12P31275 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 AL133215.2-201ENST00000609242 977 ntBASIC14.05□□□□□ -0.16
HOXC12P31275 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
HOXC12P31275 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 AC087499.5-201ENST00000452760 1342 ntBASIC14.05□□□□□ -0.16
HOXC12P31275 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HOXC12P31275 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 KRT8P12-202ENST00000472924 1397 ntBASIC14.05□□□□□ -0.16
HOXC12P31275 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 AC008894.3-201ENST00000624324 3103 ntBASIC14.05□□□□□ -0.16
HOXC12P31275 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HOXC12P31275 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.05□□□□□ -0.16
HOXC12P31275 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.05□□□□□ -0.16
HOXC12P31275 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.05□□□□□ -0.16
HOXC12P31275 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.05□□□□□ -0.16
HOXC12P31275 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.04□□□□□ -0.16
HOXC12P31275 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.04□□□□□ -0.16
HOXC12P31275 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.04□□□□□ -0.16
HOXC12P31275 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.04□□□□□ -0.16
HOXC12P31275 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HOXC12P31275 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HOXC12P31275 RPL37AP1-201ENST00000412502 279 ntBASIC14.04□□□□□ -0.16
HOXC12P31275 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
HOXC12P31275 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
HOXC12P31275 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.04□□□□□ -0.16
HOXC12P31275 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms