Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB3BP20337 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB3BP20337 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RAB3BP20337 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB3BP20337 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB3BP20337 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RAB3BP20337 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RAB3BP20337 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 AC079781.5-202ENST00000641784 3743 ntBASIC13.9□□□□□ -0.18
RAB3BP20337 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 AC073621.1-201ENST00000392730 636 ntBASIC13.9□□□□□ -0.18
RAB3BP20337 MRPL20P1-201ENST00000400819 433 ntBASIC13.9□□□□□ -0.18
RAB3BP20337 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.9□□□□□ -0.18
RAB3BP20337 AL645939.2-201ENST00000427340 991 ntBASIC13.9□□□□□ -0.18
RAB3BP20337 KRT18P27-201ENST00000427733 1299 ntBASIC13.9□□□□□ -0.18
RAB3BP20337 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB3BP20337 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB3BP20337 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB3BP20337 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB3BP20337 IGHV3-65-201ENST00000523210 341 ntBASIC13.9□□□□□ -0.18
RAB3BP20337 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB3BP20337 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RAB3BP20337 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB3BP20337 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB3BP20337 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB3BP20337 ACTL9-202ENST00000612068 1252 ntBASIC13.9□□□□□ -0.18
RAB3BP20337 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB3BP20337 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB3BP20337 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB3BP20337 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
RAB3BP20337 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB3BP20337 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RAB3BP20337 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB3BP20337 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB3BP20337 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.9□□□□□ -0.19
RAB3BP20337 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAB3BP20337 AC015656.1-201ENST00000624209 3578 ntBASIC13.89□□□□□ -0.19
RAB3BP20337 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
RAB3BP20337 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RAB3BP20337 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
RAB3BP20337 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB3BP20337 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB3BP20337 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB3BP20337 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB3BP20337 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RAB3BP20337 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB3BP20337 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB3BP20337 GPX1P2-201ENST00000429271 606 ntBASIC13.89□□□□□ -0.19
RAB3BP20337 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
RAB3BP20337 ATP5G2P1-201ENST00000433580 426 ntBASIC13.89□□□□□ -0.19
RAB3BP20337 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 FAM185BP-201ENST00000443595 716 ntBASIC13.89□□□□□ -0.19
RAB3BP20337 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB3BP20337 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB3BP20337 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.89□□□□□ -0.19
RAB3BP20337 AC021087.4-201ENST00000563761 564 ntBASIC13.89□□□□□ -0.19
RAB3BP20337 AL031432.2-201ENST00000566714 459 ntBASIC13.89□□□□□ -0.19
RAB3BP20337 AL928711.1-201ENST00000570165 459 ntBASIC13.89□□□□□ -0.19
RAB3BP20337 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.89□□□□□ -0.19
RAB3BP20337 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB3BP20337 AL645728.2-201ENST00000641974 660 ntBASIC13.89□□□□□ -0.19
RAB3BP20337 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RAB3BP20337 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RAB3BP20337 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB3BP20337 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB3BP20337 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB3BP20337 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RAB3BP20337 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB3BP20337 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms