Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ITGB4P16144 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.72■□□□□ 0.75
ITGB4P16144 BNIP3P13-201ENST00000599968 566 ntBASIC19.72■□□□□ 0.75
ITGB4P16144 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGB4P16144 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ITGB4P16144 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.72■□□□□ 0.75
ITGB4P16144 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGB4P16144 AC004899.1-201ENST00000424687 1714 ntBASIC19.72■□□□□ 0.75
ITGB4P16144 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ITGB4P16144 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ITGB4P16144 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGB4P16144 PCDHA12-202ENST00000613593 2588 ntBASIC19.72■□□□□ 0.75
ITGB4P16144 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGB4P16144 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGB4P16144 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGB4P16144 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ITGB4P16144 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGB4P16144 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ITGB4P16144 DPM3-202ENST00000368399 517 ntBASIC19.72■□□□□ 0.75
ITGB4P16144 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ITGB4P16144 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.72■□□□□ 0.75
ITGB4P16144 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.72■□□□□ 0.75
ITGB4P16144 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.72■□□□□ 0.75
ITGB4P16144 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ITGB4P16144 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
ITGB4P16144 MIR5572-201ENST00000583188 137 ntBASIC19.72■□□□□ 0.75
ITGB4P16144 U62317.3-201ENST00000608319 855 ntBASIC19.72■□□□□ 0.75
ITGB4P16144 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.71■□□□□ 0.75
ITGB4P16144 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ITGB4P16144 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ITGB4P16144 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 MPV17-204ENST00000399052 749 ntTSL 4 BASIC19.71■□□□□ 0.75
ITGB4P16144 AC253536.4-201ENST00000440539 267 ntBASIC19.71■□□□□ 0.75
ITGB4P16144 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.71■□□□□ 0.75
ITGB4P16144 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.71■□□□□ 0.75
ITGB4P16144 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGB4P16144 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.71■□□□□ 0.75
ITGB4P16144 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGB4P16144 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGB4P16144 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.71■□□□□ 0.75
ITGB4P16144 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.71■□□□□ 0.75
ITGB4P16144 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ITGB4P16144 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.71■□□□□ 0.75
ITGB4P16144 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.7■□□□□ 0.74
ITGB4P16144 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGB4P16144 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGB4P16144 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.7■□□□□ 0.74
ITGB4P16144 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 MESTP3-201ENST00000503460 968 ntBASIC19.7■□□□□ 0.74
ITGB4P16144 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.7■□□□□ 0.74
ITGB4P16144 AC009955.4-201ENST00000597192 544 ntBASIC19.7■□□□□ 0.74
ITGB4P16144 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.7■□□□□ 0.74
ITGB4P16144 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 AL023803.2-201ENST00000620080 638 ntBASIC19.7■□□□□ 0.74
ITGB4P16144 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGB4P16144 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ITGB4P16144 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.7■□□□□ 0.74
ITGB4P16144 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
ITGB4P16144 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ITGB4P16144 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ITGB4P16144 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ITGB4P16144 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ITGB4P16144 AL596087.1-201ENST00000400979 1969 ntBASIC19.7■□□□□ 0.74
ITGB4P16144 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.69■□□□□ 0.74
ITGB4P16144 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.69■□□□□ 0.74
ITGB4P16144 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.69■□□□□ 0.74
ITGB4P16144 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 AC005324.6-201ENST00000587972 613 ntBASIC19.69■□□□□ 0.74
ITGB4P16144 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.69■□□□□ 0.74
ITGB4P16144 YRDCP1-201ENST00000621419 643 ntBASIC19.69■□□□□ 0.74
ITGB4P16144 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ITGB4P16144 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms