Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA1P02708 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.01■□□□□ 0.31
CHRNA1P02708 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.01■□□□□ 0.31
CHRNA1P02708 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.01■□□□□ 0.31
CHRNA1P02708 BX539320.1-201ENST00000623759 877 ntBASIC17.01■□□□□ 0.31
CHRNA1P02708 AC132938.4-201ENST00000623835 848 ntBASIC17.01■□□□□ 0.31
CHRNA1P02708 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA1P02708 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA1P02708 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA1P02708 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17■□□□□ 0.31
CHRNA1P02708 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17■□□□□ 0.31
CHRNA1P02708 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17■□□□□ 0.31
CHRNA1P02708 KRT8P35-201ENST00000483942 1338 ntBASIC17■□□□□ 0.31
CHRNA1P02708 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA1P02708 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA1P02708 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17■□□□□ 0.31
CHRNA1P02708 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
CHRNA1P02708 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CHRNA1P02708 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17■□□□□ 0.31
CHRNA1P02708 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA1P02708 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17■□□□□ 0.31
CHRNA1P02708 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA1P02708 NME6-203ENST00000415644 849 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA1P02708 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA1P02708 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA1P02708 AC099548.2-209ENST00000480264 625 ntBASIC17■□□□□ 0.31
CHRNA1P02708 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17■□□□□ 0.31
CHRNA1P02708 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17■□□□□ 0.31
CHRNA1P02708 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17■□□□□ 0.31
CHRNA1P02708 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17■□□□□ 0.31
CHRNA1P02708 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17■□□□□ 0.31
CHRNA1P02708 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17■□□□□ 0.31
CHRNA1P02708 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17■□□□□ 0.31
CHRNA1P02708 AC138951.2-201ENST00000623455 1161 ntBASIC17■□□□□ 0.31
CHRNA1P02708 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17■□□□□ 0.31
CHRNA1P02708 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CHRNA1P02708 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17■□□□□ 0.31
CHRNA1P02708 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA1P02708 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17■□□□□ 0.31
CHRNA1P02708 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CHRNA1P02708 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
CHRNA1P02708 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA1P02708 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.99■□□□□ 0.31
CHRNA1P02708 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.99■□□□□ 0.31
CHRNA1P02708 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 MIR326-201ENST00000362220 95 ntBASIC16.99■□□□□ 0.31
CHRNA1P02708 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CHRNA1P02708 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHRNA1P02708 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.99■□□□□ 0.31
CHRNA1P02708 GOLGA2P4-201ENST00000441462 777 ntBASIC16.99■□□□□ 0.31
CHRNA1P02708 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.99■□□□□ 0.31
CHRNA1P02708 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.99■□□□□ 0.31
CHRNA1P02708 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.99■□□□□ 0.31
CHRNA1P02708 FAM86HP-204ENST00000513466 959 ntBASIC16.99■□□□□ 0.31
CHRNA1P02708 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
CHRNA1P02708 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.99■□□□□ 0.31
CHRNA1P02708 C2orf69P2-201ENST00000562032 1123 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms