Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CTNND1O60716 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.34■□□□□ 0.53
CTNND1O60716 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.34■□□□□ 0.53
CTNND1O60716 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.34■□□□□ 0.53
CTNND1O60716 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.34■□□□□ 0.53
CTNND1O60716 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CTNND1O60716 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTNND1O60716 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.34■□□□□ 0.53
CTNND1O60716 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTNND1O60716 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.34■□□□□ 0.53
CTNND1O60716 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.34■□□□□ 0.53
CTNND1O60716 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNND1O60716 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNND1O60716 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNND1O60716 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNND1O60716 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNND1O60716 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CTNND1O60716 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.33■□□□□ 0.53
CTNND1O60716 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNND1O60716 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNND1O60716 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.33■□□□□ 0.53
CTNND1O60716 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNND1O60716 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNND1O60716 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNND1O60716 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTNND1O60716 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNND1O60716 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTNND1O60716 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.33■□□□□ 0.53
CTNND1O60716 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
CTNND1O60716 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.33■□□□□ 0.52
CTNND1O60716 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTNND1O60716 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNND1O60716 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.33■□□□□ 0.52
CTNND1O60716 RPL13AP20-201ENST00000459725 609 ntBASIC18.33■□□□□ 0.52
CTNND1O60716 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.33■□□□□ 0.52
CTNND1O60716 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.33■□□□□ 0.52
CTNND1O60716 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.33■□□□□ 0.52
CTNND1O60716 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTNND1O60716 AC023310.1-201ENST00000554836 735 ntBASIC18.33■□□□□ 0.52
CTNND1O60716 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.33■□□□□ 0.52
CTNND1O60716 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.33■□□□□ 0.52
CTNND1O60716 RN7SL560P-201ENST00000577943 264 ntBASIC18.33■□□□□ 0.52
CTNND1O60716 AC103810.3-201ENST00000583567 96 ntBASIC18.33■□□□□ 0.52
CTNND1O60716 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNND1O60716 AC244093.1-201ENST00000610837 814 ntBASIC18.33■□□□□ 0.52
CTNND1O60716 AC009542.2-202ENST00000619004 1067 ntBASIC18.33■□□□□ 0.52
CTNND1O60716 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNND1O60716 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNND1O60716 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
CTNND1O60716 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.33■□□□□ 0.52
CTNND1O60716 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNND1O60716 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNND1O60716 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTNND1O60716 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNND1O60716 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNND1O60716 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTNND1O60716 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.33■□□□□ 0.52
CTNND1O60716 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CTNND1O60716 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.33■□□□□ 0.52
CTNND1O60716 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.32■□□□□ 0.52
CTNND1O60716 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.32■□□□□ 0.52
CTNND1O60716 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.32■□□□□ 0.52
CTNND1O60716 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.32■□□□□ 0.52
CTNND1O60716 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.32■□□□□ 0.52
CTNND1O60716 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.32■□□□□ 0.52
CTNND1O60716 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.32■□□□□ 0.52
CTNND1O60716 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.32■□□□□ 0.52
CTNND1O60716 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.32■□□□□ 0.52
CTNND1O60716 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CTNND1O60716 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.32■□□□□ 0.52
CTNND1O60716 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms