Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
IDH3BO43837 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.61□□□□□ -0.07
IDH3BO43837 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
IDH3BO43837 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IDH3BO43837 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
IDH3BO43837 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
IDH3BO43837 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.61□□□□□ -0.07
IDH3BO43837 AC079781.3-201ENST00000449110 356 ntBASIC14.61□□□□□ -0.07
IDH3BO43837 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
IDH3BO43837 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.61□□□□□ -0.07
IDH3BO43837 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.61□□□□□ -0.07
IDH3BO43837 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IDH3BO43837 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IDH3BO43837 AC023141.13-201ENST00000604991 943 ntBASIC14.61□□□□□ -0.07
IDH3BO43837 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.61□□□□□ -0.07
IDH3BO43837 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
IDH3BO43837 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IDH3BO43837 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
IDH3BO43837 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IDH3BO43837 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
IDH3BO43837 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IDH3BO43837 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IDH3BO43837 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.61□□□□□ -0.07
IDH3BO43837 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IDH3BO43837 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
IDH3BO43837 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IDH3BO43837 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IDH3BO43837 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.61□□□□□ -0.07
IDH3BO43837 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.61□□□□□ -0.07
IDH3BO43837 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
IDH3BO43837 AC007191.1-201ENST00000623179 2995 ntBASIC14.61□□□□□ -0.07
IDH3BO43837 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
IDH3BO43837 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IDH3BO43837 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
IDH3BO43837 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.6□□□□□ -0.07
IDH3BO43837 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
IDH3BO43837 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
IDH3BO43837 AC107918.4-201ENST00000641966 3141 ntBASIC14.6□□□□□ -0.07
IDH3BO43837 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
IDH3BO43837 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
IDH3BO43837 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.6□□□□□ -0.07
IDH3BO43837 AC140658.5-201ENST00000438532 169 ntBASIC14.6□□□□□ -0.07
IDH3BO43837 AC079776.4-201ENST00000511039 504 ntBASIC14.6□□□□□ -0.07
IDH3BO43837 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
IDH3BO43837 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.6□□□□□ -0.07
IDH3BO43837 RN7SL510P-201ENST00000581311 263 ntBASIC14.6□□□□□ -0.07
IDH3BO43837 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
IDH3BO43837 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
IDH3BO43837 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
IDH3BO43837 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.6□□□□□ -0.07
IDH3BO43837 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.6□□□□□ -0.07
IDH3BO43837 AC116407.3-201ENST00000623905 1129 ntBASIC14.6□□□□□ -0.07
IDH3BO43837 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.6□□□□□ -0.07
IDH3BO43837 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
IDH3BO43837 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.6□□□□□ -0.07
IDH3BO43837 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IDH3BO43837 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.6□□□□□ -0.07
IDH3BO43837 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.59□□□□□ -0.07
IDH3BO43837 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
IDH3BO43837 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
IDH3BO43837 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IDH3BO43837 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms