Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXA2O43364 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXA2O43364 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
HOXA2O43364 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HOXA2O43364 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXA2O43364 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HOXA2O43364 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.76■□□□□ 0.27
HOXA2O43364 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.76■□□□□ 0.27
HOXA2O43364 AC108725.1-201ENST00000495472 409 ntBASIC16.76■□□□□ 0.27
HOXA2O43364 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXA2O43364 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXA2O43364 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXA2O43364 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.76■□□□□ 0.27
HOXA2O43364 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.76■□□□□ 0.27
HOXA2O43364 AC009542.2-202ENST00000619004 1067 ntBASIC16.76■□□□□ 0.27
HOXA2O43364 AC138951.2-201ENST00000623455 1161 ntBASIC16.76■□□□□ 0.27
HOXA2O43364 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.76■□□□□ 0.27
HOXA2O43364 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXA2O43364 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXA2O43364 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.76■□□□□ 0.27
HOXA2O43364 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HOXA2O43364 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.76■□□□□ 0.27
HOXA2O43364 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HOXA2O43364 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HOXA2O43364 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HOXA2O43364 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXA2O43364 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXA2O43364 AD000864.1-201ENST00000624076 2295 ntBASIC16.75■□□□□ 0.27
HOXA2O43364 AC080080.1-201ENST00000625121 2420 ntBASIC16.75■□□□□ 0.27
HOXA2O43364 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXA2O43364 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXA2O43364 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
HOXA2O43364 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.75■□□□□ 0.27
HOXA2O43364 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HOXA2O43364 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 AC114812.1-204ENST00000449669 728 ntBASIC16.75■□□□□ 0.27
HOXA2O43364 RPL13AP20-201ENST00000459725 609 ntBASIC16.75■□□□□ 0.27
HOXA2O43364 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.75■□□□□ 0.27
HOXA2O43364 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.75■□□□□ 0.27
HOXA2O43364 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.75■□□□□ 0.27
HOXA2O43364 AC145423.3-201ENST00000615987 467 ntBASIC16.75■□□□□ 0.27
HOXA2O43364 GPR182-203ENST00000622922 591 ntBASIC16.75■□□□□ 0.27
HOXA2O43364 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXA2O43364 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.75■□□□□ 0.27
HOXA2O43364 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXA2O43364 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HOXA2O43364 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.75■□□□□ 0.27
HOXA2O43364 AL596087.1-201ENST00000400979 1969 ntBASIC16.75■□□□□ 0.27
HOXA2O43364 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HOXA2O43364 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HOXA2O43364 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXA2O43364 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXA2O43364 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.74■□□□□ 0.27
HOXA2O43364 AHCYP2-201ENST00000430630 1300 ntBASIC16.74■□□□□ 0.27
HOXA2O43364 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXA2O43364 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXA2O43364 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.74■□□□□ 0.27
HOXA2O43364 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.74■□□□□ 0.27
HOXA2O43364 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXA2O43364 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HOXA2O43364 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
HOXA2O43364 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HOXA2O43364 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.74■□□□□ 0.27
HOXA2O43364 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.74■□□□□ 0.27
HOXA2O43364 FAM197Y7-201ENST00000432892 766 ntBASIC16.74■□□□□ 0.27
HOXA2O43364 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.74■□□□□ 0.27
HOXA2O43364 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HOXA2O43364 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.74■□□□□ 0.27
HOXA2O43364 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.74■□□□□ 0.27
HOXA2O43364 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.74■□□□□ 0.27
HOXA2O43364 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms