Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC21.34■■□□□ 1.01
CHD2O14647 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC21.34■■□□□ 1.01
CHD2O14647 AC002472.3-201ENST00000640124 621 ntBASIC21.34■■□□□ 1.01
CHD2O14647 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CHD2O14647 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21.34■■□□□ 1.01
CHD2O14647 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
CHD2O14647 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CHD2O14647 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 AC234644.1-201ENST00000406065 370 ntBASIC21.34■■□□□ 1.01
CHD2O14647 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC21.34■■□□□ 1.01
CHD2O14647 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC21.34■■□□□ 1.01
CHD2O14647 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC21.34■■□□□ 1.01
CHD2O14647 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC21.34■■□□□ 1.01
CHD2O14647 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC21.34■■□□□ 1.01
CHD2O14647 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC21.34■■□□□ 1.01
CHD2O14647 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC21.34■■□□□ 1.01
CHD2O14647 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC21.34■■□□□ 1.01
CHD2O14647 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CHD2O14647 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHD2O14647 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD2O14647 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD2O14647 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD2O14647 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD2O14647 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD2O14647 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD2O14647 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHD2O14647 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD2O14647 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHD2O14647 HNRNPA1P41-201ENST00000397777 928 ntBASIC21.33■■□□□ 1.01
CHD2O14647 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC21.33■■□□□ 1.01
CHD2O14647 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD2O14647 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC21.33■■□□□ 1.01
CHD2O14647 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHD2O14647 RN7SL163P-201ENST00000583100 276 ntBASIC21.33■■□□□ 1.01
CHD2O14647 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC21.33■■□□□ 1.01
CHD2O14647 AC242376.2-201ENST00000619355 883 ntBASIC21.33■■□□□ 1.01
CHD2O14647 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CHD2O14647 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHD2O14647 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHD2O14647 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CHD2O14647 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC21.33■■□□□ 1
CHD2O14647 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHD2O14647 CAP2P1-201ENST00000557743 1390 ntBASIC21.33■■□□□ 1
CHD2O14647 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC21.33■■□□□ 1
CHD2O14647 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
CHD2O14647 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CHD2O14647 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CHD2O14647 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.32■■□□□ 1
CHD2O14647 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC21.32■■□□□ 1
CHD2O14647 RPL18P13-201ENST00000478088 569 ntBASIC21.32■■□□□ 1
CHD2O14647 NDUFS6P1-201ENST00000485187 316 ntBASIC21.32■■□□□ 1
CHD2O14647 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC21.32■■□□□ 1
CHD2O14647 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC21.32■■□□□ 1
CHD2O14647 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC21.32■■□□□ 1
CHD2O14647 MIR3677-201ENST00000578964 60 ntBASIC21.32■■□□□ 1
CHD2O14647 GMFG-209ENST00000600322 622 ntTSL 5 BASIC21.32■■□□□ 1
CHD2O14647 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
CHD2O14647 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CHD2O14647 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC21.32■■□□□ 1
CHD2O14647 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC21.32■■□□□ 1
CHD2O14647 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 DNAJB1P1-201ENST00000429417 1024 ntBASIC21.32■■□□□ 1
CHD2O14647 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC21.32■■□□□ 1
CHD2O14647 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC21.32■■□□□ 1
CHD2O14647 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 AC090857.1-201ENST00000527400 390 ntBASIC21.32■■□□□ 1
CHD2O14647 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC21.32■■□□□ 1
CHD2O14647 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD2O14647 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.31■■□□□ 1
CHD2O14647 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CHD2O14647 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD2O14647 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD2O14647 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC21.31■■□□□ 1
CHD2O14647 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms