Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CACNB4O00305 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CACNB4O00305 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.58■□□□□ 0.08
CACNB4O00305 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.58■□□□□ 0.08
CACNB4O00305 AC069224.1-201ENST00000566372 1715 ntBASIC15.58■□□□□ 0.08
CACNB4O00305 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CACNB4O00305 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 AL512384.1-201ENST00000406683 331 ntBASIC15.58■□□□□ 0.08
CACNB4O00305 AC098850.1-201ENST00000419919 790 ntBASIC15.58■□□□□ 0.08
CACNB4O00305 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CACNB4O00305 KRT18P64-201ENST00000434946 1219 ntBASIC15.58■□□□□ 0.08
CACNB4O00305 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.58■□□□□ 0.08
CACNB4O00305 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.58■□□□□ 0.08
CACNB4O00305 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 CTBP2P3-201ENST00000585629 1255 ntBASIC15.58■□□□□ 0.08
CACNB4O00305 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.58■□□□□ 0.08
CACNB4O00305 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CACNB4O00305 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.58■□□□□ 0.08
CACNB4O00305 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.58■□□□□ 0.08
CACNB4O00305 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.58■□□□□ 0.08
CACNB4O00305 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CACNB4O00305 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.58■□□□□ 0.08
CACNB4O00305 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.58■□□□□ 0.08
CACNB4O00305 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CACNB4O00305 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
CACNB4O00305 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CACNB4O00305 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CACNB4O00305 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CACNB4O00305 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CACNB4O00305 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 AC008894.3-201ENST00000624324 3103 ntBASIC15.57■□□□□ 0.08
CACNB4O00305 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.57■□□□□ 0.08
CACNB4O00305 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
CACNB4O00305 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.57■□□□□ 0.08
CACNB4O00305 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.57■□□□□ 0.08
CACNB4O00305 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.57■□□□□ 0.08
CACNB4O00305 FAM86LP-201ENST00000478302 853 ntBASIC15.57■□□□□ 0.08
CACNB4O00305 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CACNB4O00305 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.57■□□□□ 0.08
CACNB4O00305 AC092552.1-201ENST00000547243 906 ntBASIC15.57■□□□□ 0.08
CACNB4O00305 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.57■□□□□ 0.08
CACNB4O00305 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CACNB4O00305 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.57■□□□□ 0.08
CACNB4O00305 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CACNB4O00305 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.57■□□□□ 0.08
CACNB4O00305 AL391069.4-201ENST00000609583 481 ntBASIC15.57■□□□□ 0.08
CACNB4O00305 MIR8072-201ENST00000614241 80 ntBASIC15.57■□□□□ 0.08
CACNB4O00305 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CACNB4O00305 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CACNB4O00305 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.57■□□□□ 0.08
CACNB4O00305 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.57■□□□□ 0.08
CACNB4O00305 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.57■□□□□ 0.08
CACNB4O00305 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CACNB4O00305 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CACNB4O00305 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.57■□□□□ 0.08
CACNB4O00305 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CACNB4O00305 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CACNB4O00305 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CACNB4O00305 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.56■□□□□ 0.08
CACNB4O00305 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CACNB4O00305 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CACNB4O00305 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CACNB4O00305 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CACNB4O00305 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.56■□□□□ 0.08
CACNB4O00305 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CACNB4O00305 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CACNB4O00305 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CACNB4O00305 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CACNB4O00305 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms