Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB1Q9Y5F3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 INE1-201ENST00000456273 945 ntBASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 PHKG1P2-201ENST00000457537 863 ntBASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 AC135586.1-201ENST00000539323 574 ntBASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 BANF1P1-201ENST00000553684 263 ntBASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB1Q9Y5F3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 AC022494.1-201ENST00000466044 728 ntBASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 AC104794.3-201ENST00000566840 1248 ntBASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHB1Q9Y5F3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms