Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 MIR4313-201ENST00000580760 101 ntBASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 CICP13-201ENST00000422015 2789 ntBASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.79■□□□□ 0.12
VPS9D1Q9Y2B5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 AC136604.1-201ENST00000418535 575 ntBASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 RN7SL828P-201ENST00000607615 303 ntBASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 AC008147.4-201ENST00000617570 1204 ntBASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 AC006213.5-201ENST00000619673 288 ntBASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 AL356094.1-201ENST00000624663 1212 ntBASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 AC018892.3-201ENST00000623986 2499 ntBASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 TSPY26P-202ENST00000565928 3884 ntBASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VPS9D1Q9Y2B5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 AC105250.1-201ENST00000509378 2057 ntBASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 KRT8P12-202ENST00000472924 1397 ntBASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS9D1Q9Y2B5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms