Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 AC015936.2-201ENST00000593177 259 ntBASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
PDZRN3Q9UPQ7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 U82695.1-201ENST00000635752 1889 ntBASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 AC011270.2-201ENST00000624293 2550 ntBASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 AL606495.2-201ENST00000605867 535 ntBASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 AC133552.6-201ENST00000613406 534 ntBASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 AC126177.1-201ENST00000547829 2218 ntBASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.35■□□□□ 0.85
PDZRN3Q9UPQ7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 AP003680.1-201ENST00000598970 3660 ntBASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 AC093724.1-201ENST00000448659 1027 ntBASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 AC092337.1-201ENST00000568699 1129 ntBASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 CTBP2P3-201ENST00000585629 1255 ntBASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDZRN3Q9UPQ7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 AC103702.1-201ENST00000548801 2630 ntBASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms