Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 AL118558.3-201ENST00000607414 1079 ntBASIC18.11■□□□□ 0.49
PNMA3Q9UL41 AP005019.2-201ENST00000615104 511 ntBASIC18.11■□□□□ 0.49
PNMA3Q9UL41 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.11■□□□□ 0.49
PNMA3Q9UL41 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PNMA3Q9UL41 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.11■□□□□ 0.49
PNMA3Q9UL41 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.11■□□□□ 0.49
PNMA3Q9UL41 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.11■□□□□ 0.49
PNMA3Q9UL41 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.11■□□□□ 0.49
PNMA3Q9UL41 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PNMA3Q9UL41 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PNMA3Q9UL41 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PNMA3Q9UL41 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.11■□□□□ 0.49
PNMA3Q9UL41 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PNMA3Q9UL41 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PNMA3Q9UL41 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 MIR326-201ENST00000362220 95 ntBASIC18.1■□□□□ 0.49
PNMA3Q9UL41 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 AP001258.2-201ENST00000529891 490 ntBASIC18.1■□□□□ 0.49
PNMA3Q9UL41 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.1■□□□□ 0.49
PNMA3Q9UL41 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 AC006001.1-201ENST00000325130 474 ntBASIC18.09■□□□□ 0.49
PNMA3Q9UL41 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 AC138951.2-201ENST00000623455 1161 ntBASIC18.09■□□□□ 0.49
PNMA3Q9UL41 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.09■□□□□ 0.49
PNMA3Q9UL41 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PNMA3Q9UL41 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PNMA3Q9UL41 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.08■□□□□ 0.49
PNMA3Q9UL41 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.08■□□□□ 0.49
PNMA3Q9UL41 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PNMA3Q9UL41 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PNMA3Q9UL41 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PNMA3Q9UL41 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PNMA3Q9UL41 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PNMA3Q9UL41 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PNMA3Q9UL41 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PNMA3Q9UL41 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PNMA3Q9UL41 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PNMA3Q9UL41 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PNMA3Q9UL41 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PNMA3Q9UL41 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.08■□□□□ 0.48
PNMA3Q9UL41 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.08■□□□□ 0.48
PNMA3Q9UL41 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PNMA3Q9UL41 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.08■□□□□ 0.48
PNMA3Q9UL41 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.08■□□□□ 0.48
PNMA3Q9UL41 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms