Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.05■□□□□ 0.16
HACD3Q9P035 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.05■□□□□ 0.16
HACD3Q9P035 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.05■□□□□ 0.16
HACD3Q9P035 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.05■□□□□ 0.16
HACD3Q9P035 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 KRT8P12-202ENST00000472924 1397 ntBASIC16.05■□□□□ 0.16
HACD3Q9P035 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HACD3Q9P035 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.05■□□□□ 0.16
HACD3Q9P035 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HACD3Q9P035 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 METTL21AP1-201ENST00000438852 635 ntBASIC16.05■□□□□ 0.16
HACD3Q9P035 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.05■□□□□ 0.16
HACD3Q9P035 FAM86GP-201ENST00000448322 971 ntBASIC16.05■□□□□ 0.16
HACD3Q9P035 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.05■□□□□ 0.16
HACD3Q9P035 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.05■□□□□ 0.16
HACD3Q9P035 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.05■□□□□ 0.16
HACD3Q9P035 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.05■□□□□ 0.16
HACD3Q9P035 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.05■□□□□ 0.16
HACD3Q9P035 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.05■□□□□ 0.16
HACD3Q9P035 AL450472.2-201ENST00000603663 1156 ntBASIC16.05■□□□□ 0.16
HACD3Q9P035 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.05■□□□□ 0.16
HACD3Q9P035 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.05■□□□□ 0.16
HACD3Q9P035 PAUPAR-201ENST00000630360 2965 ntBASIC16.05■□□□□ 0.16
HACD3Q9P035 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
HACD3Q9P035 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
HACD3Q9P035 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.05■□□□□ 0.16
HACD3Q9P035 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.05■□□□□ 0.16
HACD3Q9P035 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.05■□□□□ 0.16
HACD3Q9P035 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HACD3Q9P035 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
HACD3Q9P035 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.04■□□□□ 0.16
HACD3Q9P035 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HACD3Q9P035 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
HACD3Q9P035 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HACD3Q9P035 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.04■□□□□ 0.16
HACD3Q9P035 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HACD3Q9P035 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.04■□□□□ 0.16
HACD3Q9P035 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
HACD3Q9P035 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.04■□□□□ 0.16
HACD3Q9P035 KLF2P3-201ENST00000451977 1087 ntBASIC16.04■□□□□ 0.16
HACD3Q9P035 PHKG1P2-201ENST00000457537 863 ntBASIC16.04■□□□□ 0.16
HACD3Q9P035 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.04■□□□□ 0.16
HACD3Q9P035 HLA-V-204ENST00000476601 1289 ntBASIC16.04■□□□□ 0.16
HACD3Q9P035 AC125807.1-201ENST00000483097 614 ntBASIC16.04■□□□□ 0.16
HACD3Q9P035 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.04■□□□□ 0.16
HACD3Q9P035 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.04■□□□□ 0.16
HACD3Q9P035 AL079307.3-201ENST00000556114 283 ntBASIC16.04■□□□□ 0.16
HACD3Q9P035 AC140878.1-201ENST00000565277 250 ntBASIC16.04■□□□□ 0.16
HACD3Q9P035 AC051619.7-201ENST00000568314 623 ntBASIC16.04■□□□□ 0.16
HACD3Q9P035 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.04■□□□□ 0.16
HACD3Q9P035 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.04■□□□□ 0.16
HACD3Q9P035 AL589739.1-201ENST00000607720 493 ntBASIC16.04■□□□□ 0.16
HACD3Q9P035 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.04■□□□□ 0.16
HACD3Q9P035 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.04■□□□□ 0.16
HACD3Q9P035 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HACD3Q9P035 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.04■□□□□ 0.16
HACD3Q9P035 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.04■□□□□ 0.16
HACD3Q9P035 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
HACD3Q9P035 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.04■□□□□ 0.16
HACD3Q9P035 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HACD3Q9P035 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HACD3Q9P035 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HACD3Q9P035 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HACD3Q9P035 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.03■□□□□ 0.16
HACD3Q9P035 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HACD3Q9P035 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HACD3Q9P035 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HACD3Q9P035 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HACD3Q9P035 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.03■□□□□ 0.16
HACD3Q9P035 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
HACD3Q9P035 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms