Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 AL133466.1-201ENST00000447582 150 ntBASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 SPCS2P2-201ENST00000603270 608 ntBASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP4Q9C0A0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 MIR33B-201ENST00000385104 96 ntBASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 AC100850.1-201ENST00000506768 649 ntBASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 RN7SL574P-201ENST00000581512 297 ntBASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 AL645728.2-202ENST00000641679 227 ntBASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 KRT8P4-201ENST00000509735 1454 ntBASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP4Q9C0A0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNTNAP4Q9C0A0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CNTNAP4Q9C0A0 AC069224.1-201ENST00000566372 1715 ntBASIC19.52■□□□□ 0.71
CNTNAP4Q9C0A0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.52■□□□□ 0.71
CNTNAP4Q9C0A0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CNTNAP4Q9C0A0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNTNAP4Q9C0A0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CNTNAP4Q9C0A0 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 AL136309.1-201ENST00000403917 691 ntBASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 MAGEA5-201ENST00000446757 942 ntBASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 RN7SL774P-201ENST00000577467 290 ntBASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 AC018695.7-201ENST00000624587 2492 ntBASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 RN7SL11P-201ENST00000471305 293 ntBASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 FGFR3P5-201ENST00000564496 886 ntBASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.51■□□□□ 0.71
CNTNAP4Q9C0A0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms