Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC11Q96DB2 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.3■□□□□ 0.2
HDAC11Q96DB2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 AL079307.3-201ENST00000556114 283 ntBASIC16.3■□□□□ 0.2
HDAC11Q96DB2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 AC097359.3-201ENST00000603982 1210 ntBASIC16.3■□□□□ 0.2
HDAC11Q96DB2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 CICP13-201ENST00000422015 2789 ntBASIC16.3■□□□□ 0.2
HDAC11Q96DB2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HDAC11Q96DB2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.29■□□□□ 0.2
HDAC11Q96DB2 AC136604.1-201ENST00000418535 575 ntBASIC16.29■□□□□ 0.2
HDAC11Q96DB2 HIST3H2BA-201ENST00000436555 524 ntBASIC16.29■□□□□ 0.2
HDAC11Q96DB2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 CNN2P2-201ENST00000443536 909 ntBASIC16.29■□□□□ 0.2
HDAC11Q96DB2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 CNN2P3-201ENST00000450201 906 ntBASIC16.29■□□□□ 0.2
HDAC11Q96DB2 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.29■□□□□ 0.2
HDAC11Q96DB2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 AL136317.3-201ENST00000618497 906 ntBASIC16.29■□□□□ 0.2
HDAC11Q96DB2 Z92544.3-201ENST00000624747 417 ntBASIC16.29■□□□□ 0.2
HDAC11Q96DB2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.29■□□□□ 0.2
HDAC11Q96DB2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 AC020658.6-201ENST00000623564 1870 ntBASIC16.29■□□□□ 0.2
HDAC11Q96DB2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.29■□□□□ 0.2
HDAC11Q96DB2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC11Q96DB2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms