Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 KRT18P34-201ENST00000488218 1270 ntBASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 AC112191.1-201ENST00000523689 701 ntBASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 AP002472.1-201ENST00000577490 586 ntBASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 AL161645.1-201ENST00000622716 1255 ntBASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.38□□□□□ -0.27
RTN4IP1Q8WWV3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 AC023274.1-201ENST00000418278 595 ntBASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 AC245100.5-201ENST00000452108 331 ntBASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 POLD2P1-201ENST00000511220 997 ntBASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 AC002347.1-201ENST00000569543 541 ntBASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 AL078644.1-201ENST00000609881 752 ntBASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RTN4IP1Q8WWV3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms