Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 NDUFAB1P1-201ENST00000404262 460 ntBASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 NSD1-211ENST00000511258 809 ntTSL 3 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 AC025262.2-201ENST00000623975 1056 ntBASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 MIR3677-201ENST00000578964 60 ntBASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 AC138466.3-201ENST00000619983 221 ntBASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 AC012313.1-201ENST00000593393 3059 ntBASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
ALMS1Q8TCU4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 PRORSD1P-202ENST00000563365 2154 ntBASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AL645937.2-201ENST00000396808 931 ntBASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AC106794.1-201ENST00000506935 792 ntBASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AL031713.1-201ENST00000564813 661 ntBASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 MIR4313-201ENST00000580760 101 ntBASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AC073911.3-201ENST00000624401 631 ntBASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AC022616.1-201ENST00000518688 554 ntBASIC10.35□□□□□ -0.75
ALMS1Q8TCU4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms