Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.3■□□□□ 0.68
RTL9Q8NET4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL9Q8NET4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL9Q8NET4 AC020907.1-201ENST00000616460 1350 ntBASIC19.29■□□□□ 0.68
RTL9Q8NET4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL9Q8NET4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTL9Q8NET4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTL9Q8NET4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL9Q8NET4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL9Q8NET4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL9Q8NET4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL9Q8NET4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTL9Q8NET4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTL9Q8NET4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTL9Q8NET4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 AC084018.2-201ENST00000613093 2607 ntBASIC19.29■□□□□ 0.68
RTL9Q8NET4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTL9Q8NET4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.29■□□□□ 0.68
RTL9Q8NET4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
RTL9Q8NET4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.28■□□□□ 0.68
RTL9Q8NET4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.28■□□□□ 0.68
RTL9Q8NET4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.28■□□□□ 0.68
RTL9Q8NET4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.28■□□□□ 0.68
RTL9Q8NET4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RTL9Q8NET4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.28■□□□□ 0.68
RTL9Q8NET4 AC016694.1-201ENST00000434179 700 ntBASIC19.28■□□□□ 0.68
RTL9Q8NET4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.28■□□□□ 0.68
RTL9Q8NET4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RTL9Q8NET4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RTL9Q8NET4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.28■□□□□ 0.68
RTL9Q8NET4 AC244669.2-201ENST00000612320 853 ntBASIC19.28■□□□□ 0.68
RTL9Q8NET4 AP005019.2-201ENST00000615104 511 ntBASIC19.28■□□□□ 0.68
RTL9Q8NET4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RTL9Q8NET4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 CYP2T1P-202ENST00000641596 2535 ntBASIC19.28■□□□□ 0.68
RTL9Q8NET4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL9Q8NET4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.27■□□□□ 0.68
RTL9Q8NET4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTL9Q8NET4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTL9Q8NET4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL9Q8NET4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTL9Q8NET4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL9Q8NET4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTL9Q8NET4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL9Q8NET4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
RTL9Q8NET4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.27■□□□□ 0.68
RTL9Q8NET4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL9Q8NET4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL9Q8NET4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
RTL9Q8NET4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
RTL9Q8NET4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL9Q8NET4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.27■□□□□ 0.68
RTL9Q8NET4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL9Q8NET4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL9Q8NET4 CNN2P8-201ENST00000421872 913 ntBASIC19.27■□□□□ 0.68
RTL9Q8NET4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.27■□□□□ 0.68
RTL9Q8NET4 AC099548.2-209ENST00000480264 625 ntBASIC19.27■□□□□ 0.68
RTL9Q8NET4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.27■□□□□ 0.68
RTL9Q8NET4 AC025279.2-201ENST00000569730 653 ntBASIC19.27■□□□□ 0.68
RTL9Q8NET4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.27■□□□□ 0.68
RTL9Q8NET4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
RTL9Q8NET4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTL9Q8NET4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RTL9Q8NET4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTL9Q8NET4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms