Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 RPL7P3-201ENST00000441388 714 ntBASIC16.78■□□□□ 0.28
RNF135Q8IUD6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 LINC02199-201ENST00000506655 2702 ntBASIC16.78■□□□□ 0.28
RNF135Q8IUD6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 KRT8P22-201ENST00000562317 1415 ntBASIC16.78■□□□□ 0.28
RNF135Q8IUD6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF135Q8IUD6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 ACTG1P3-201ENST00000431775 1114 ntBASIC16.77■□□□□ 0.28
RNF135Q8IUD6 BCRP2-202ENST00000447763 634 ntBASIC16.77■□□□□ 0.28
RNF135Q8IUD6 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 BCRP6-201ENST00000510112 632 ntBASIC16.77■□□□□ 0.28
RNF135Q8IUD6 BCRP7-201ENST00000511549 544 ntBASIC16.77■□□□□ 0.28
RNF135Q8IUD6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 TDH-203ENST00000531764 1110 ntBASIC16.77■□□□□ 0.28
RNF135Q8IUD6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 MIR5189-201ENST00000577370 114 ntBASIC16.77■□□□□ 0.28
RNF135Q8IUD6 AC074044.1-201ENST00000609673 707 ntBASIC16.77■□□□□ 0.28
RNF135Q8IUD6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RNF135Q8IUD6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF135Q8IUD6 AC006449.5-201ENST00000610658 2098 ntBASIC16.77■□□□□ 0.27
RNF135Q8IUD6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF135Q8IUD6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF135Q8IUD6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF135Q8IUD6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF135Q8IUD6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF135Q8IUD6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.77■□□□□ 0.27
RNF135Q8IUD6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF135Q8IUD6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.76■□□□□ 0.27
RNF135Q8IUD6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 GGT3P-204ENST00000453783 1664 ntBASIC16.76■□□□□ 0.27
RNF135Q8IUD6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms