Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 AC074338.1-201ENST00000416825 156 ntBASIC15.18■□□□□ 0.02
RNF44Q7L0R7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 SPTLC1P1-201ENST00000447199 261 ntBASIC15.18■□□□□ 0.02
RNF44Q7L0R7 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 AC104794.3-201ENST00000566840 1248 ntBASIC15.18■□□□□ 0.02
RNF44Q7L0R7 AC092337.1-201ENST00000568699 1129 ntBASIC15.18■□□□□ 0.02
RNF44Q7L0R7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 AC018892.3-201ENST00000623986 2499 ntBASIC15.18■□□□□ 0.02
RNF44Q7L0R7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF44Q7L0R7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 AC004790.1-201ENST00000612686 536 ntBASIC15.17■□□□□ 0.02
RNF44Q7L0R7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.17■□□□□ 0.02
RNF44Q7L0R7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF44Q7L0R7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF44Q7L0R7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms