Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KCNIP4Q6PIL6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.33□□□□□ -0.43
KCNIP4Q6PIL6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
KCNIP4Q6PIL6 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 AL441883.1-201ENST00000566170 1045 ntBASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 AC011558.1-201ENST00000623459 338 ntBASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 AC136759.1-202ENST00000530858 2194 ntBASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KCNIP4Q6PIL6 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 INTS4P1-203ENST00000641008 3683 ntBASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP4Q6PIL6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms