Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL16A1Q07092 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL16A1Q07092 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
COL16A1Q07092 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL16A1Q07092 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
COL16A1Q07092 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL16A1Q07092 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
COL16A1Q07092 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC20.65■□□□□ 0.9
COL16A1Q07092 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL16A1Q07092 KLF2P1-201ENST00000447438 1042 ntBASIC20.65■□□□□ 0.9
COL16A1Q07092 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.65■□□□□ 0.9
COL16A1Q07092 AC022616.1-201ENST00000518688 554 ntBASIC20.65■□□□□ 0.9
COL16A1Q07092 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
COL16A1Q07092 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
COL16A1Q07092 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.65■□□□□ 0.9
COL16A1Q07092 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
COL16A1Q07092 AC105020.1-201ENST00000435356 2205 ntBASIC20.65■□□□□ 0.9
COL16A1Q07092 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL16A1Q07092 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL16A1Q07092 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.65■□□□□ 0.9
COL16A1Q07092 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL16A1Q07092 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL16A1Q07092 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL16A1Q07092 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COL16A1Q07092 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.65■□□□□ 0.9
COL16A1Q07092 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL16A1Q07092 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.65■□□□□ 0.9
COL16A1Q07092 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
COL16A1Q07092 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COL16A1Q07092 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL16A1Q07092 MIR557-201ENST00000385239 98 ntBASIC20.64■□□□□ 0.9
COL16A1Q07092 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COL16A1Q07092 AP000358.1-201ENST00000456260 156 ntBASIC20.64■□□□□ 0.9
COL16A1Q07092 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC20.64■□□□□ 0.9
COL16A1Q07092 AC008805.1-201ENST00000590892 364 ntBASIC20.64■□□□□ 0.9
COL16A1Q07092 AC011247.3-201ENST00000603297 438 ntBASIC20.64■□□□□ 0.9
COL16A1Q07092 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC20.64■□□□□ 0.9
COL16A1Q07092 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL16A1Q07092 IL9RP3-201ENST00000442856 1674 ntBASIC20.64■□□□□ 0.89
COL16A1Q07092 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
COL16A1Q07092 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL16A1Q07092 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL16A1Q07092 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.64■□□□□ 0.89
COL16A1Q07092 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
COL16A1Q07092 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
COL16A1Q07092 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC20.64■□□□□ 0.89
COL16A1Q07092 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC20.64■□□□□ 0.89
COL16A1Q07092 DUX4L47-201ENST00000566374 394 ntBASIC20.64■□□□□ 0.89
COL16A1Q07092 PHBP15-201ENST00000574228 665 ntBASIC20.64■□□□□ 0.89
COL16A1Q07092 NAT9-220ENST00000582870 896 ntTSL 5 BASIC20.64■□□□□ 0.89
COL16A1Q07092 AC005041.3-201ENST00000606287 649 ntBASIC20.64■□□□□ 0.89
COL16A1Q07092 RNF216P1-203ENST00000404404 2427 ntBASIC20.63■□□□□ 0.89
COL16A1Q07092 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.63■□□□□ 0.89
COL16A1Q07092 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL16A1Q07092 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC20.63■□□□□ 0.89
COL16A1Q07092 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC20.63■□□□□ 0.89
COL16A1Q07092 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL16A1Q07092 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.63■□□□□ 0.89
COL16A1Q07092 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL16A1Q07092 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL16A1Q07092 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
COL16A1Q07092 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL16A1Q07092 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL16A1Q07092 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL16A1Q07092 COX20P1-201ENST00000366529 357 ntBASIC20.63■□□□□ 0.89
COL16A1Q07092 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC20.63■□□□□ 0.89
COL16A1Q07092 AL627422.1-201ENST00000434104 580 ntBASIC20.63■□□□□ 0.89
COL16A1Q07092 AGPAT5P1-201ENST00000455855 1019 ntBASIC20.63■□□□□ 0.89
COL16A1Q07092 RN7SL396P-201ENST00000471086 295 ntBASIC20.63■□□□□ 0.89
COL16A1Q07092 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
COL16A1Q07092 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.63■□□□□ 0.89
COL16A1Q07092 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC20.63■□□□□ 0.89
COL16A1Q07092 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC20.63■□□□□ 0.89
COL16A1Q07092 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC20.63■□□□□ 0.89
COL16A1Q07092 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
COL16A1Q07092 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COL16A1Q07092 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.63■□□□□ 0.89
COL16A1Q07092 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL16A1Q07092 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL16A1Q07092 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL16A1Q07092 AC244394.1-201ENST00000435000 1665 ntBASIC20.62■□□□□ 0.89
COL16A1Q07092 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL16A1Q07092 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL16A1Q07092 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL16A1Q07092 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.62■□□□□ 0.89
COL16A1Q07092 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL16A1Q07092 FAM58BP-201ENST00000439056 645 ntBASIC20.62■□□□□ 0.89
COL16A1Q07092 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC20.62■□□□□ 0.89
COL16A1Q07092 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL16A1Q07092 DUX4L46-201ENST00000566845 751 ntBASIC20.62■□□□□ 0.89
COL16A1Q07092 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL16A1Q07092 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.62■□□□□ 0.89
COL16A1Q07092 HPN-206ENST00000597419 1212 ntTSL 5 BASIC20.62■□□□□ 0.89
COL16A1Q07092 AC006158.1-201ENST00000610661 249 ntBASIC20.62■□□□□ 0.89
COL16A1Q07092 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC20.62■□□□□ 0.89
COL16A1Q07092 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL16A1Q07092 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.62■□□□□ 0.89
COL16A1Q07092 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL16A1Q07092 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.61■□□□□ 0.89
COL16A1Q07092 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms