Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 AC005829.1-201ENST00000570002 483 ntBASIC15.27■□□□□ 0.04
HMGCS1Q01581 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.27■□□□□ 0.04
HMGCS1Q01581 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMGCS1Q01581 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCS1Q01581 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.27■□□□□ 0.03
HMGCS1Q01581 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCS1Q01581 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HMGCS1Q01581 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCS1Q01581 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCS1Q01581 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.27■□□□□ 0.03
HMGCS1Q01581 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCS1Q01581 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCS1Q01581 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.27■□□□□ 0.03
HMGCS1Q01581 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.27■□□□□ 0.03
HMGCS1Q01581 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.27■□□□□ 0.03
HMGCS1Q01581 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCS1Q01581 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCS1Q01581 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCS1Q01581 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HMGCS1Q01581 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HMGCS1Q01581 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 AC006058.4-201ENST00000624016 1670 ntBASIC15.26■□□□□ 0.03
HMGCS1Q01581 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 AC005237.2-201ENST00000434368 219 ntBASIC15.26■□□□□ 0.03
HMGCS1Q01581 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 PHKG1P2-201ENST00000457537 863 ntBASIC15.26■□□□□ 0.03
HMGCS1Q01581 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 AC026979.3-201ENST00000607315 403 ntBASIC15.26■□□□□ 0.03
HMGCS1Q01581 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HMGCS1Q01581 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMGCS1Q01581 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.25■□□□□ 0.03
HMGCS1Q01581 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HMGCS1Q01581 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms