Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
USP11P51784 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
USP11P51784 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
USP11P51784 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP11P51784 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.79■□□□□ 0.44
USP11P51784 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.79■□□□□ 0.44
USP11P51784 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP11P51784 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP11P51784 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.79■□□□□ 0.44
USP11P51784 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
USP11P51784 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.79■□□□□ 0.44
USP11P51784 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.79■□□□□ 0.44
USP11P51784 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.79■□□□□ 0.44
USP11P51784 TP53TG3HP-202ENST00000569755 579 ntBASIC17.79■□□□□ 0.44
USP11P51784 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.79■□□□□ 0.44
USP11P51784 CHCHD2P3-201ENST00000603038 451 ntBASIC17.79■□□□□ 0.44
USP11P51784 AL662799.1-202ENST00000614205 422 ntBASIC17.79■□□□□ 0.44
USP11P51784 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.79■□□□□ 0.44
USP11P51784 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.79■□□□□ 0.44
USP11P51784 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
USP11P51784 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
USP11P51784 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP11P51784 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP11P51784 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.79■□□□□ 0.44
USP11P51784 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
USP11P51784 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.79■□□□□ 0.44
USP11P51784 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.79■□□□□ 0.44
USP11P51784 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
USP11P51784 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP11P51784 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP11P51784 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.78■□□□□ 0.44
USP11P51784 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
USP11P51784 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP11P51784 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.78■□□□□ 0.44
USP11P51784 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP11P51784 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP11P51784 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.78■□□□□ 0.44
USP11P51784 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.78■□□□□ 0.44
USP11P51784 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.78■□□□□ 0.44
USP11P51784 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.78■□□□□ 0.44
USP11P51784 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.78■□□□□ 0.44
USP11P51784 AC036164.1-201ENST00000570544 333 ntBASIC17.78■□□□□ 0.44
USP11P51784 AC093726.1-201ENST00000608064 963 ntBASIC17.78■□□□□ 0.44
USP11P51784 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.78■□□□□ 0.44
USP11P51784 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP11P51784 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
USP11P51784 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP11P51784 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
USP11P51784 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP11P51784 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
USP11P51784 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
USP11P51784 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
USP11P51784 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.78■□□□□ 0.44
USP11P51784 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP11P51784 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP11P51784 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.78■□□□□ 0.44
USP11P51784 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.78■□□□□ 0.44
USP11P51784 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP11P51784 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP11P51784 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.77■□□□□ 0.44
USP11P51784 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
USP11P51784 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.77■□□□□ 0.44
USP11P51784 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
USP11P51784 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.77■□□□□ 0.44
USP11P51784 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.77■□□□□ 0.44
USP11P51784 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.77■□□□□ 0.44
USP11P51784 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
USP11P51784 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.77■□□□□ 0.44
USP11P51784 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.77■□□□□ 0.44
USP11P51784 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.77■□□□□ 0.44
USP11P51784 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.77■□□□□ 0.44
USP11P51784 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.77■□□□□ 0.44
USP11P51784 LINC02084-201ENST00000606069 1096 ntBASIC17.77■□□□□ 0.44
USP11P51784 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP11P51784 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.77■□□□□ 0.44
USP11P51784 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.77■□□□□ 0.43
USP11P51784 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.77■□□□□ 0.43
USP11P51784 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.77■□□□□ 0.43
USP11P51784 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.77■□□□□ 0.43
USP11P51784 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.77■□□□□ 0.43
USP11P51784 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP11P51784 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP11P51784 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
USP11P51784 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.77■□□□□ 0.43
USP11P51784 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP11P51784 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
USP11P51784 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms