Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC19.64■□□□□ 0.73
RFC4P35249 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.64■□□□□ 0.73
RFC4P35249 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.64■□□□□ 0.73
RFC4P35249 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.64■□□□□ 0.73
RFC4P35249 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.64■□□□□ 0.73
RFC4P35249 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.64■□□□□ 0.73
RFC4P35249 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.64■□□□□ 0.73
RFC4P35249 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFC4P35249 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
RFC4P35249 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFC4P35249 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RFC4P35249 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.64■□□□□ 0.73
RFC4P35249 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
RFC4P35249 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RFC4P35249 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.63■□□□□ 0.73
RFC4P35249 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
RFC4P35249 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.63■□□□□ 0.73
RFC4P35249 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RFC4P35249 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.63■□□□□ 0.73
RFC4P35249 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.63■□□□□ 0.73
RFC4P35249 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.63■□□□□ 0.73
RFC4P35249 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.63■□□□□ 0.73
RFC4P35249 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.63■□□□□ 0.73
RFC4P35249 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.63■□□□□ 0.73
RFC4P35249 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.63■□□□□ 0.73
RFC4P35249 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.63■□□□□ 0.73
RFC4P35249 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.63■□□□□ 0.73
RFC4P35249 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RFC4P35249 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.63■□□□□ 0.73
RFC4P35249 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.63■□□□□ 0.73
RFC4P35249 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFC4P35249 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.62■□□□□ 0.73
RFC4P35249 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RFC4P35249 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RFC4P35249 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.62■□□□□ 0.73
RFC4P35249 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.62■□□□□ 0.73
RFC4P35249 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.62■□□□□ 0.73
RFC4P35249 IMP3P2-201ENST00000489760 475 ntBASIC19.62■□□□□ 0.73
RFC4P35249 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.62■□□□□ 0.73
RFC4P35249 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.62■□□□□ 0.73
RFC4P35249 MIR4722-201ENST00000578292 60 ntBASIC19.62■□□□□ 0.73
RFC4P35249 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.62■□□□□ 0.73
RFC4P35249 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.62■□□□□ 0.73
RFC4P35249 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.62■□□□□ 0.73
RFC4P35249 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.62■□□□□ 0.73
RFC4P35249 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RFC4P35249 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RFC4P35249 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.62■□□□□ 0.73
RFC4P35249 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFC4P35249 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RFC4P35249 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
RFC4P35249 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.61■□□□□ 0.73
RFC4P35249 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFC4P35249 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.61■□□□□ 0.73
RFC4P35249 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RFC4P35249 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.61■□□□□ 0.73
RFC4P35249 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
RFC4P35249 CYP46A4P-201ENST00000414953 267 ntBASIC19.61■□□□□ 0.73
RFC4P35249 AC079178.1-201ENST00000420915 656 ntBASIC19.61■□□□□ 0.73
RFC4P35249 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms