Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RPA3P35244 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.03■□□□□ 0.16
RPA3P35244 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RPA3P35244 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RPA3P35244 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.03■□□□□ 0.16
RPA3P35244 HTR5BP-201ENST00000430851 1154 ntBASIC16.03■□□□□ 0.16
RPA3P35244 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.03■□□□□ 0.16
RPA3P35244 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.03■□□□□ 0.16
RPA3P35244 KRT18P34-201ENST00000488218 1270 ntBASIC16.03■□□□□ 0.16
RPA3P35244 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RPA3P35244 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.03■□□□□ 0.16
RPA3P35244 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RPA3P35244 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.03■□□□□ 0.16
RPA3P35244 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 AC010327.4-202ENST00000591484 748 ntBASIC16.03■□□□□ 0.16
RPA3P35244 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
RPA3P35244 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.03■□□□□ 0.16
RPA3P35244 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RPA3P35244 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
RPA3P35244 AL359258.3-201ENST00000622910 2331 ntBASIC16.03■□□□□ 0.16
RPA3P35244 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RPA3P35244 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.03■□□□□ 0.16
RPA3P35244 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RPA3P35244 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.03■□□□□ 0.16
RPA3P35244 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RPA3P35244 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RPA3P35244 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RPA3P35244 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 AP001282.1-201ENST00000531301 1499 ntBASIC16.03■□□□□ 0.16
RPA3P35244 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.03■□□□□ 0.16
RPA3P35244 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RPA3P35244 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RPA3P35244 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RPA3P35244 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.02■□□□□ 0.16
RPA3P35244 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
RPA3P35244 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPA3P35244 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RPA3P35244 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPA3P35244 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RPA3P35244 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.02■□□□□ 0.16
RPA3P35244 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RPA3P35244 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RPA3P35244 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.02■□□□□ 0.16
RPA3P35244 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.02■□□□□ 0.16
RPA3P35244 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RPA3P35244 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPA3P35244 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPA3P35244 LINC00528-201ENST00000600723 2160 ntBASIC16.02■□□□□ 0.16
RPA3P35244 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.02■□□□□ 0.16
RPA3P35244 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RPA3P35244 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPA3P35244 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RPA3P35244 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.02■□□□□ 0.16
RPA3P35244 MKNK2P1-201ENST00000437526 628 ntBASIC16.02■□□□□ 0.16
RPA3P35244 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.02■□□□□ 0.16
RPA3P35244 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.02■□□□□ 0.16
RPA3P35244 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RPA3P35244 AC005829.1-201ENST00000570002 483 ntBASIC16.02■□□□□ 0.16
RPA3P35244 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.02■□□□□ 0.16
RPA3P35244 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RPA3P35244 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.02■□□□□ 0.16
RPA3P35244 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.02■□□□□ 0.16
RPA3P35244 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RPA3P35244 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.02■□□□□ 0.15
RPA3P35244 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPA3P35244 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RPA3P35244 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.02■□□□□ 0.15
RPA3P35244 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPA3P35244 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPA3P35244 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.02■□□□□ 0.15
RPA3P35244 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RPA3P35244 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.02■□□□□ 0.15
RPA3P35244 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPA3P35244 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPA3P35244 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RPA3P35244 WASH6P-202ENST00000359512 1437 ntBASIC16.02■□□□□ 0.15
RPA3P35244 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
RPA3P35244 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RPA3P35244 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
RPA3P35244 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.01■□□□□ 0.15
RPA3P35244 AC067930.6-201ENST00000623257 4947 ntBASIC16.01■□□□□ 0.15
RPA3P35244 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RPA3P35244 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPA3P35244 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPA3P35244 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RPA3P35244 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.01■□□□□ 0.15
RPA3P35244 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.01■□□□□ 0.15
RPA3P35244 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms