Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 WASH4P-201ENST00000564273 1246 ntBASIC13.37□□□□□ -0.27
COL8A2P25067 AL450472.2-201ENST00000603663 1156 ntBASIC13.37□□□□□ -0.27
COL8A2P25067 MIR8072-201ENST00000614241 80 ntBASIC13.37□□□□□ -0.27
COL8A2P25067 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
COL8A2P25067 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.37□□□□□ -0.27
COL8A2P25067 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.37□□□□□ -0.27
COL8A2P25067 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.37□□□□□ -0.27
COL8A2P25067 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.37□□□□□ -0.27
COL8A2P25067 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
COL8A2P25067 CU639417.3-201ENST00000624240 1404 ntBASIC13.37□□□□□ -0.27
COL8A2P25067 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COL8A2P25067 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.36□□□□□ -0.27
COL8A2P25067 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.36□□□□□ -0.27
COL8A2P25067 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.36□□□□□ -0.27
COL8A2P25067 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 AC018892.3-201ENST00000623986 2499 ntBASIC13.36□□□□□ -0.27
COL8A2P25067 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.36□□□□□ -0.27
COL8A2P25067 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
COL8A2P25067 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.36□□□□□ -0.27
COL8A2P25067 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.36□□□□□ -0.27
COL8A2P25067 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.36□□□□□ -0.27
COL8A2P25067 AP006294.1-201ENST00000415407 339 ntBASIC13.36□□□□□ -0.27
COL8A2P25067 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.36□□□□□ -0.27
COL8A2P25067 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
COL8A2P25067 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.36□□□□□ -0.27
COL8A2P25067 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.36□□□□□ -0.27
COL8A2P25067 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.36□□□□□ -0.27
COL8A2P25067 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
COL8A2P25067 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.36□□□□□ -0.27
COL8A2P25067 RARRES2P5-201ENST00000564013 466 ntBASIC13.36□□□□□ -0.27
COL8A2P25067 CTBP2P3-201ENST00000585629 1255 ntBASIC13.36□□□□□ -0.27
COL8A2P25067 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.36□□□□□ -0.27
COL8A2P25067 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.36□□□□□ -0.27
COL8A2P25067 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.36□□□□□ -0.27
COL8A2P25067 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.36□□□□□ -0.27
COL8A2P25067 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.36□□□□□ -0.27
COL8A2P25067 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.36□□□□□ -0.27
COL8A2P25067 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL8A2P25067 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
COL8A2P25067 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
COL8A2P25067 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
COL8A2P25067 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
COL8A2P25067 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
COL8A2P25067 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
COL8A2P25067 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.35□□□□□ -0.27
COL8A2P25067 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
COL8A2P25067 KRT18P64-201ENST00000434946 1219 ntBASIC13.35□□□□□ -0.27
COL8A2P25067 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.35□□□□□ -0.27
COL8A2P25067 RPL13P2-201ENST00000440687 659 ntBASIC13.35□□□□□ -0.27
COL8A2P25067 KRT17P7-201ENST00000451704 1104 ntBASIC13.35□□□□□ -0.27
COL8A2P25067 RN7SL752P-201ENST00000463779 287 ntBASIC13.35□□□□□ -0.27
COL8A2P25067 ELK1P1-201ENST00000485699 580 ntBASIC13.35□□□□□ -0.27
COL8A2P25067 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.35□□□□□ -0.27
COL8A2P25067 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL8A2P25067 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.35□□□□□ -0.27
COL8A2P25067 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.35□□□□□ -0.27
COL8A2P25067 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms