Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.84□□□□□ -0.19
SFTPBP07988 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SFTPBP07988 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
SFTPBP07988 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.84□□□□□ -0.19
SFTPBP07988 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 AC140658.5-201ENST00000438532 169 ntBASIC13.84□□□□□ -0.19
SFTPBP07988 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SFTPBP07988 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.84□□□□□ -0.19
SFTPBP07988 AP002472.1-201ENST00000577490 586 ntBASIC13.84□□□□□ -0.19
SFTPBP07988 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.84□□□□□ -0.19
SFTPBP07988 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.84□□□□□ -0.19
SFTPBP07988 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.84□□□□□ -0.19
SFTPBP07988 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.84□□□□□ -0.19
SFTPBP07988 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 AC013268.4-201ENST00000637413 2228 ntBASIC13.84□□□□□ -0.19
SFTPBP07988 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.84□□□□□ -0.19
SFTPBP07988 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SFTPBP07988 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.84□□□□□ -0.19
SFTPBP07988 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.84□□□□□ -0.19
SFTPBP07988 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.84□□□□□ -0.19
SFTPBP07988 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SFTPBP07988 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SFTPBP07988 TNRC18P2-201ENST00000417666 2714 ntBASIC13.84□□□□□ -0.19
SFTPBP07988 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
SFTPBP07988 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
SFTPBP07988 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.83□□□□□ -0.19
SFTPBP07988 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.83□□□□□ -0.19
SFTPBP07988 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.83□□□□□ -0.19
SFTPBP07988 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.83□□□□□ -0.2
SFTPBP07988 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SFTPBP07988 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.83□□□□□ -0.2
SFTPBP07988 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.83□□□□□ -0.2
SFTPBP07988 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.83□□□□□ -0.2
SFTPBP07988 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.83□□□□□ -0.2
SFTPBP07988 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SFTPBP07988 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.83□□□□□ -0.2
SFTPBP07988 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.83□□□□□ -0.2
SFTPBP07988 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.83□□□□□ -0.2
SFTPBP07988 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.83□□□□□ -0.2
SFTPBP07988 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.83□□□□□ -0.2
SFTPBP07988 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.83□□□□□ -0.2
SFTPBP07988 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.83□□□□□ -0.2
SFTPBP07988 AC092902.6-201ENST00000641783 218 ntBASIC13.83□□□□□ -0.2
SFTPBP07988 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SFTPBP07988 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SFTPBP07988 AC073439.1-201ENST00000624121 1774 ntBASIC13.83□□□□□ -0.2
SFTPBP07988 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SFTPBP07988 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SFTPBP07988 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SFTPBP07988 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SFTPBP07988 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.82□□□□□ -0.2
SFTPBP07988 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SFTPBP07988 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SFTPBP07988 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.82□□□□□ -0.2
SFTPBP07988 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.82□□□□□ -0.2
SFTPBP07988 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SFTPBP07988 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms