Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 POU5F1P6-201ENST00000466990 990 ntBASIC15.68■□□□□ 0.1
PDGFBP01127 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.68■□□□□ 0.1
PDGFBP01127 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.68■□□□□ 0.1
PDGFBP01127 ENPP7P14-201ENST00000621765 1040 ntBASIC15.68■□□□□ 0.1
PDGFBP01127 AC100757.4-201ENST00000626934 759 ntBASIC15.68■□□□□ 0.1
PDGFBP01127 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PDGFBP01127 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PDGFBP01127 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
PDGFBP01127 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDGFBP01127 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.68■□□□□ 0.1
PDGFBP01127 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PDGFBP01127 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.68■□□□□ 0.1
PDGFBP01127 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
PDGFBP01127 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.67■□□□□ 0.1
PDGFBP01127 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PDGFBP01127 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.67■□□□□ 0.1
PDGFBP01127 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PDGFBP01127 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 AL133267.1-201ENST00000398220 340 ntBASIC15.67■□□□□ 0.1
PDGFBP01127 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.67■□□□□ 0.1
PDGFBP01127 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.67■□□□□ 0.1
PDGFBP01127 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 RNMTL1P1-201ENST00000454103 560 ntBASIC15.67■□□□□ 0.1
PDGFBP01127 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.67■□□□□ 0.1
PDGFBP01127 AC021723.1-201ENST00000486306 515 ntBASIC15.67■□□□□ 0.1
PDGFBP01127 AC100850.1-201ENST00000506768 649 ntBASIC15.67■□□□□ 0.1
PDGFBP01127 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
PDGFBP01127 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
PDGFBP01127 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.67■□□□□ 0.1
PDGFBP01127 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
PDGFBP01127 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.67■□□□□ 0.1
PDGFBP01127 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 AC020922.3-201ENST00000595064 547 ntBASIC15.67■□□□□ 0.1
PDGFBP01127 AC073413.1-201ENST00000603927 732 ntBASIC15.67■□□□□ 0.1
PDGFBP01127 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.67■□□□□ 0.1
PDGFBP01127 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.67■□□□□ 0.1
PDGFBP01127 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDGFBP01127 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.67■□□□□ 0.1
PDGFBP01127 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PDGFBP01127 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PDGFBP01127 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.66■□□□□ 0.1
PDGFBP01127 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PDGFBP01127 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PDGFBP01127 AL354877.1-201ENST00000424412 413 ntBASIC15.66■□□□□ 0.1
PDGFBP01127 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.66■□□□□ 0.1
PDGFBP01127 NOC2LP1-201ENST00000450578 752 ntBASIC15.66■□□□□ 0.1
PDGFBP01127 RN7SL8P-201ENST00000461771 266 ntBASIC15.66■□□□□ 0.1
PDGFBP01127 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
PDGFBP01127 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.66■□□□□ 0.1
PDGFBP01127 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PDGFBP01127 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDGFBP01127 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.66■□□□□ 0.1
PDGFBP01127 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.66■□□□□ 0.1
PDGFBP01127 AC103988.2-201ENST00000561804 725 ntBASIC15.66■□□□□ 0.1
PDGFBP01127 AC013355.1-201ENST00000562625 723 ntBASIC15.66■□□□□ 0.1
PDGFBP01127 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.66■□□□□ 0.1
PDGFBP01127 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.66■□□□□ 0.1
PDGFBP01127 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.66■□□□□ 0.1
PDGFBP01127 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.66■□□□□ 0.1
PDGFBP01127 OR10B1P-201ENST00000601666 907 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms