Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
PPP1R3DO95685 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PPP1R3DO95685 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 AC127383.1-201ENST00000444697 1800 ntBASIC14.34□□□□□ -0.11
PPP1R3DO95685 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 AC004987.2-201ENST00000395959 1148 ntBASIC14.34□□□□□ -0.11
PPP1R3DO95685 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 AC023274.1-201ENST00000418278 595 ntBASIC14.34□□□□□ -0.11
PPP1R3DO95685 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 FAM197Y3-203ENST00000618346 717 ntBASIC14.34□□□□□ -0.11
PPP1R3DO95685 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP1R3DO95685 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 AL365209.1-201ENST00000624418 6473 ntBASIC14.34□□□□□ -0.11
PPP1R3DO95685 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PPP1R3DO95685 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
PPP1R3DO95685 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PPP1R3DO95685 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PPP1R3DO95685 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PPP1R3DO95685 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.33□□□□□ -0.11
PPP1R3DO95685 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
PPP1R3DO95685 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PPP1R3DO95685 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PPP1R3DO95685 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PPP1R3DO95685 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
PPP1R3DO95685 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 FAM220BP-201ENST00000377689 816 ntBASIC14.33□□□□□ -0.12
PPP1R3DO95685 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 RN7SL589P-201ENST00000481268 310 ntBASIC14.33□□□□□ -0.12
PPP1R3DO95685 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 AC092902.6-201ENST00000641783 218 ntBASIC14.33□□□□□ -0.12
PPP1R3DO95685 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PPP1R3DO95685 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP1R3DO95685 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms