Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.89□□□□□ -0.03
PRAMEF2O60811 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF2O60811 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF2O60811 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF2O60811 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.89□□□□□ -0.03
PRAMEF2O60811 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF2O60811 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
PRAMEF2O60811 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.89□□□□□ -0.03
PRAMEF2O60811 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PRAMEF2O60811 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.89□□□□□ -0.03
PRAMEF2O60811 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.88□□□□□ -0.03
PRAMEF2O60811 SERBP1P3-201ENST00000459980 809 ntBASIC14.88□□□□□ -0.03
PRAMEF2O60811 RN7SL618P-201ENST00000477850 296 ntBASIC14.88□□□□□ -0.03
PRAMEF2O60811 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 AC025048.6-201ENST00000634326 1161 ntBASIC14.88□□□□□ -0.03
PRAMEF2O60811 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 AP005117.1-202ENST00000581724 1908 ntBASIC14.88□□□□□ -0.03
PRAMEF2O60811 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRAMEF2O60811 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.88□□□□□ -0.03
PRAMEF2O60811 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.87□□□□□ -0.03
PRAMEF2O60811 KRT8P12-202ENST00000472924 1397 ntBASIC14.87□□□□□ -0.03
PRAMEF2O60811 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 ZNF890P-202ENST00000530367 1156 ntBASIC14.87□□□□□ -0.03
PRAMEF2O60811 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 AL450472.2-201ENST00000603663 1156 ntBASIC14.87□□□□□ -0.03
PRAMEF2O60811 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRAMEF2O60811 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.87□□□□□ -0.03
PRAMEF2O60811 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PRAMEF2O60811 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRAMEF2O60811 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms