Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
R3HCC1Q9Y3T6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 AC002347.1-201ENST00000569543 541 ntBASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 AC010507.1-201ENST00000633895 436 ntBASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 AC016027.1-202ENST00000607927 1699 ntBASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 LINC01101-201ENST00000622953 1884 ntBASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.24■□□□□ 0.51
R3HCC1Q9Y3T6 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 AC091167.2-201ENST00000579581 588 ntBASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 AC004877.2-201ENST00000623941 599 ntBASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
R3HCC1Q9Y3T6 AC232323.1-201ENST00000540724 2099 ntBASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 REXO1L5P-201ENST00000622260 2098 ntBASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.22■□□□□ 0.51
R3HCC1Q9Y3T6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms