Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
COPS3Q9UNS2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COPS3Q9UNS2 CICP24-201ENST00000605464 2705 ntBASIC14.19□□□□□ -0.14
COPS3Q9UNS2 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.19□□□□□ -0.14
COPS3Q9UNS2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
COPS3Q9UNS2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COPS3Q9UNS2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
COPS3Q9UNS2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
COPS3Q9UNS2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 AL138918.1-201ENST00000568306 659 ntBASIC14.18□□□□□ -0.14
COPS3Q9UNS2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 AC064836.3-201ENST00000607928 673 ntBASIC14.18□□□□□ -0.14
COPS3Q9UNS2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COPS3Q9UNS2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 FOXO1B-201ENST00000504678 1527 ntBASIC14.17□□□□□ -0.14
COPS3Q9UNS2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 MIR4313-201ENST00000580760 101 ntBASIC14.17□□□□□ -0.14
COPS3Q9UNS2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 BNIP3P1-202ENST00000550043 1585 ntBASIC14.17□□□□□ -0.14
COPS3Q9UNS2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
COPS3Q9UNS2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms