Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 ZNF890P-202ENST00000530367 1156 ntBASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 AC008894.3-201ENST00000624324 3103 ntBASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
NPIPA1Q9UND3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 OR8S1-201ENST00000310194 1080 ntBASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 AL008721.1-201ENST00000609964 604 ntBASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 MIR6069-201ENST00000620069 79 ntBASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA1Q9UND3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 AC022188.1-201ENST00000620960 1664 ntBASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 MIR648-201ENST00000385046 94 ntBASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 DGCR5-201ENST00000399539 862 ntBASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 AC093004.1-201ENST00000508850 424 ntBASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.63□□□□□ -0.07
NPIPA1Q9UND3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms