Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.51■□□□□ 0.71
UPF2Q9HAU5 HCG4P8-203ENST00000443049 980 ntBASIC19.51■□□□□ 0.71
UPF2Q9HAU5 RNPS1P1-201ENST00000507437 918 ntBASIC19.51■□□□□ 0.71
UPF2Q9HAU5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 AC002347.1-201ENST00000569543 541 ntBASIC19.51■□□□□ 0.71
UPF2Q9HAU5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 MIR4751-201ENST00000578027 74 ntBASIC19.51■□□□□ 0.71
UPF2Q9HAU5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 AGAP7P-201ENST00000582299 2062 ntBASIC19.51■□□□□ 0.71
UPF2Q9HAU5 AGAP14-201ENST00000624701 2060 ntBASIC19.51■□□□□ 0.71
UPF2Q9HAU5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.51■□□□□ 0.71
UPF2Q9HAU5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 AC126365.1-201ENST00000578585 1514 ntBASIC19.51■□□□□ 0.71
UPF2Q9HAU5 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPF2Q9HAU5 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 AP002414.3-201ENST00000589352 1468 ntBASIC19.5■□□□□ 0.71
UPF2Q9HAU5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 RPS2P28-201ENST00000314255 741 ntBASIC19.5■□□□□ 0.71
UPF2Q9HAU5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 AL009183.1-201ENST00000603760 355 ntBASIC19.5■□□□□ 0.71
UPF2Q9HAU5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 AC013726.1-201ENST00000563747 2285 ntBASIC19.5■□□□□ 0.71
UPF2Q9HAU5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPF2Q9HAU5 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UPF2Q9HAU5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPF2Q9HAU5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms