Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SH2D4AQ9H788 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 AC120045.2-201ENST00000567334 178 ntBASIC18.38■□□□□ 0.53
SH2D4AQ9H788 AC124283.3-201ENST00000570869 594 ntBASIC18.38■□□□□ 0.53
SH2D4AQ9H788 AC233724.13-201ENST00000598383 410 ntBASIC18.38■□□□□ 0.53
SH2D4AQ9H788 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.38■□□□□ 0.53
SH2D4AQ9H788 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.38■□□□□ 0.53
SH2D4AQ9H788 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 MTHFR-217ENST00000641820 1569 ntBASIC18.38■□□□□ 0.53
SH2D4AQ9H788 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.38■□□□□ 0.53
SH2D4AQ9H788 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 C1QBPP1-201ENST00000400117 770 ntBASIC18.37■□□□□ 0.53
SH2D4AQ9H788 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 AC022210.1-201ENST00000449856 793 ntBASIC18.37■□□□□ 0.53
SH2D4AQ9H788 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 USP32P1-208ENST00000506594 1164 ntBASIC18.37■□□□□ 0.53
SH2D4AQ9H788 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 MIR5189-201ENST00000577370 114 ntBASIC18.37■□□□□ 0.53
SH2D4AQ9H788 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 AL162727.3-201ENST00000635661 2787 ntBASIC18.37■□□□□ 0.53
SH2D4AQ9H788 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 AL121723.1-201ENST00000445194 1519 ntBASIC18.37■□□□□ 0.53
SH2D4AQ9H788 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH2D4AQ9H788 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 AL662844.4-201ENST00000606367 2838 ntBASIC18.36■□□□□ 0.53
SH2D4AQ9H788 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH2D4AQ9H788 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms