Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 AC005237.2-201ENST00000434368 219 ntBASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 AL671883.3-201ENST00000603274 991 ntBASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 AC055717.3-201ENST00000622967 595 ntBASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC68Q9H2F9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CCDC68Q9H2F9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC68Q9H2F9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC68Q9H2F9 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC68Q9H2F9 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CCDC68Q9H2F9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC68Q9H2F9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.96■□□□□ 0.14
CCDC68Q9H2F9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CCDC68Q9H2F9 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
CCDC68Q9H2F9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC68Q9H2F9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 LINC01225-203ENST00000563550 1244 ntBASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC68Q9H2F9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 AL691432.1-201ENST00000596308 1422 ntBASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 AL139010.1-201ENST00000454878 894 ntBASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 AC069335.1-201ENST00000489972 472 ntBASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 SLC25A39P2-201ENST00000537614 270 ntBASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC68Q9H2F9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms