Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXP3Q9BZS1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 KRT8P44-201ENST00000441609 1350 ntBASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 C18orf15-201ENST00000623680 2534 ntBASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 AC243562.2-201ENST00000561247 970 ntBASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 SPCS2P1-201ENST00000561636 679 ntBASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXP3Q9BZS1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 AL355306.1-201ENST00000415580 579 ntBASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 AL671277.1-201ENST00000429656 993 ntBASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 AC093520.2-201ENST00000561830 333 ntBASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 AC099522.2-201ENST00000607001 744 ntBASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 AC007292.2-201ENST00000593524 1812 ntBASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 AC092127.1-201ENST00000567093 3455 ntBASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXP3Q9BZS1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms