Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC8.11□□□□□ -1.11
KRTAP3-1Q9BYR8 AL691432.1-201ENST00000596308 1422 ntBASIC8.11□□□□□ -1.11
KRTAP3-1Q9BYR8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
KRTAP3-1Q9BYR8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
KRTAP3-1Q9BYR8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
KRTAP3-1Q9BYR8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
KRTAP3-1Q9BYR8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
KRTAP3-1Q9BYR8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC8.11□□□□□ -1.11
KRTAP3-1Q9BYR8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC8.11□□□□□ -1.11
KRTAP3-1Q9BYR8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC8.11□□□□□ -1.11
KRTAP3-1Q9BYR8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 CICP4-201ENST00000447359 2812 ntBASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 MED22-202ENST00000371999 987 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AL353626.3-201ENST00000413399 657 ntBASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AC026396.1-201ENST00000419388 421 ntBASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 DUXAP7-201ENST00000431038 689 ntBASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AC018712.1-201ENST00000455767 687 ntBASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AC117500.6-201ENST00000624871 588 ntBASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC8.1□□□□□ -1.11
KRTAP3-1Q9BYR8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
KRTAP3-1Q9BYR8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC8.09□□□□□ -1.11
KRTAP3-1Q9BYR8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
KRTAP3-1Q9BYR8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
KRTAP3-1Q9BYR8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms