Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 AC073439.1-201ENST00000624121 1774 ntBASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 AC112191.1-201ENST00000523689 701 ntBASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHRDL1Q9BU40 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 AP002414.2-201ENST00000591780 3365 ntBASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 AC099522.2-201ENST00000607001 744 ntBASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CHRDL1Q9BU40 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 AL022342.1-201ENST00000400363 863 ntBASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.65□□□□□ -0.38
CHRDL1Q9BU40 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms